| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8311 |
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| Symbol | dppC |
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| ID | 7365262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 235881 |
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| End bp | 236738 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641867 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002540164 |
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| Protein GI | 222080300 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGCCA TATTCTCAAC CCGTTTCGTG AAAGACAGCC GGACCCGTGC TCTGATTTTG
CCGGGCGCGA TCCTCATGAT GATCCTGCTC GTTGCTACCC TTGCCCCGAT CATACCGTTG
TCCGATCCGA CAAAAATGAA CGTCGCCCAA CGCTTCAGTT CACCTACAGC AACCTACTGG
TTGGGAACTG ACGAATTTGG TCGCGATATC CTGAGCCGGC TCATTTGGGG AGCACGTGCG
ACCCTCGCTG TCGCGCTTTC CTCATCGATT ATTGCCTGTG TAGCGGGTGT GTCACTGGCC
TTGATCGGAG GTTACCTTGG GGAGTTGGCG GAAACCGTTA CCGTGCGGCT GACAGATATC
ATCCTCTCGT TCCCGACCAT CCTGCTCGCT CTGCTTGCTG TTACTATCCT GGGGCCGAGC
CTCTGGACCT TGATCTTCGT TCTTTCAATT TTGAACACGC CCGGCTTCAC CCGCGTCGCA
TACGGCGAAG TCCTTGCGCT GCGGACAGCA GAATTTGTTG AAGCGGCTCA AGTGCTTGGT
CTTCGAACGC CGAGGATACT TCTCGGGACG ATCCTGCCGA ATATCCTGGC CCCTATACTC
GTTCAGTTCT CGCTCACAGT CGCTTCCGCC ATCGTGGTCG AGTCCGGACT TTCGTTTCTT
GGCCTCGGCG TCGTGCCCCC GACACCTTCC TGGGGAACAA TGATCCGTGG CGCGCGGGCA
GCACTCGACT TCAACGTGCT CGTTCTTGTG TGGCCATGTC TTGCCCTGAT TATCTCAATA
TTCACGCTCA ACTGGCTTTG CGACGGACTG CGTGACGCTC TCGACATTCG TTCCAGAAAG
ACCGGAGACG CCGAATGA
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| Protein sequence | MNAIFSTRFV KDSRTRALIL PGAILMMILL VATLAPIIPL SDPTKMNVAQ RFSSPTATYW
LGTDEFGRDI LSRLIWGARA TLAVALSSSI IACVAGVSLA LIGGYLGELA ETVTVRLTDI
ILSFPTILLA LLAVTILGPS LWTLIFVLSI LNTPGFTRVA YGEVLALRTA EFVEAAQVLG
LRTPRILLGT ILPNILAPIL VQFSLTVASA IVVESGLSFL GLGVVPPTPS WGTMIRGARA
ALDFNVLVLV WPCLALIISI FTLNWLCDGL RDALDIRSRK TGDAE
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