Gene Avi_8292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8292 
SymbolistA 
ID7365248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand- 
Start bp219847 
End bp220458 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID643641853 
ProductIS21 family transposase 
Protein accessionYP_002540150 
Protein GI222080286 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0256876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC GTCAGGCAGC GAAGCGTTTC AACGTACCGC CCGACAGCGT GGCTAAGATG 
GTAGCCTATT CGACGCCCCC TGACTATCAG GGGCGTTCAC CGATCCTGCG TCCGAAGCTG 
GATGCGTTTG TTTCGACGAT CGAGCATTGG CCTGATGAGG ATCTGAAGGT TCCGCGCAAG 
CAGCAATGTA CGACCAAGTT GGTGTTTGAC CGGCTGTATG AGAAGTGCGG GTTAACCGAC 
GGCGCCACGA TCATCAAGGA TTACATGCGC GAGCGGGATC AGCGCCGTCA CGAGGTGTTC 
GCGCCGCTGT CGCATCCGCC CCGCCATCCG CAGGCCGACT TCGGTGAGGC GACTGGGGAC 
ATGCTTCAGC CTGATGTGCT GGTGGCGATG TTGCGGCTAA ATGATCTTGG CCGGAGCGCC 
AAACGCCTTT CGAAGGAGTT CGGATGCGGT CATCAGGACC TCTGGCTCAG AGGATATGTC 
GACTTATACC AGCCTGCGTT GAGGCTGACT CAGGTTGTGG ATTCCCAAAG CGATGAAAGT 
GTGAATCAAT GGCGTCCTGC ATCGAAAGGA CGTGGCGATG GGACAAGCGA TCGGCTTGCG 
GGAAGATTTT GA
 
Protein sequence
MTQRQAAKRF NVPPDSVAKM VAYSTPPDYQ GRSPILRPKL DAFVSTIEHW PDEDLKVPRK 
QQCTTKLVFD RLYEKCGLTD GATIIKDYMR ERDQRRHEVF APLSHPPRHP QADFGEATGD 
MLQPDVLVAM LRLNDLGRSA KRLSKEFGCG HQDLWLRGYV DLYQPALRLT QVVDSQSDES 
VNQWRPASKG RGDGTSDRLA GRF