| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8287 |
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| Symbol | tms2 |
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| ID | 7365244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 213627 |
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| End bp | 215015 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643641850 |
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| Product | indole acetimide hydrolase |
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| Protein accession | YP_002540147 |
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| Protein GI | 222080283 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAA TATCATCAAT TTCGCAGACG TTGAGAGCTC TAAGGAGGAA ACAGTATTCA
TGTCGGGACC TAGTTGAGTC TTTGGTCTCC CGTTCGGAAT CTGCAACCCA CTTGAACGCC
TTCGCTGCAA CTGACTGGCT TCATCTAAGA AATGAGGCAG ATCGTGTGGA TAGGAACGGA
TCCGGCGGGG TGGGCCTTAT GGGTATCCCC CTTTGTTTCA AAGCAAACAT AGCGACTGGA
ATATTCCCGA CGTCCGCTGG CACACAGGGA CTGCTTCGGC ACAAGCCAGC TATTCCGGCA
AAGATAGTAG AGCGACTTCA TTCAGCCGGT GCACTGATTG GGGCGTCTGG AAATATGCAC
GAGTTATCTT TTGGTATAAC AAATGACAAC AAGACGTTTG GTCCCGCACG AAACCCTTGG
AACCAGGCTC TGATCTCTGG TGGATCGAGT GGGGGCGTTG CTGTCTCGGT AGCAGCCAAT
TTGATGTTGG GCGGCATAGG AACTGACACC GGCGCTTCTG TTAGGCTTCC GGCGGCACTA
TGTGGGGTTG TTGGTTTTCG TCCAACATTT GGCAACTATC CAACCGATGG CATTGTGCCG
GTGAGTCCGT CGAGAGACAC TCCTGGCCTC ATTGTCCGCT CGGTTGAAGA TGCGGTTCTA
TTGGATCGGA TCATTCGCAA CAAGTGTCCT ACTCAAAATA TGTCACTCAA GGGGCTTCGG
TTGGGTCTGC CTCGATCCCA CTTCTTTGAT AATCTCGAAC CGCATGTTGC GGCAGCCTCG
GAACGAGCAA TTCGACGTCT GGCTACCAAC CAAATGACGT TCGTGGAAGC GGACATTCCG
AATGTTGCGG AGCTAACCCG CAAAGTGAGC TTGCCAGTTG CTATTTATGA GTTTCCCCGA
GCGCTCATGG CCTATCTCTC GTTTCACGGG ATTGGAAACA CGTTTGATGA GTTGATACAG
AATATTCAGG ATCCACAGGT CTATGACCTC GTGCAATCTC AACTATCAAA AGGACTTATT
TCAGAGTCGG TCTACCGGAG GGCGCTTCGG TGCTACAAGC CCAGGCTAAA AGCAACATAT
GAGAATTATT ACTCCTCCAA CGGCCTTGAC GCTGTTTTAT TTCCTTCAGT TCCCCTAACC
GCCAAACCAG TAGGGCTGCA GACTACGCTT GTACACAACG GCGTCGAGAC TGATACCTTT
GGAATTTTCG TTCGAAACCT AGATCCTAGC AGTAACATCG GGCTGCCAAG CTTGAGCGTC
CCAGTGTCGT TGACACCCGA CAGGCTACCG GTTGGAATAC AGATCGAGGG CCCGTTTGGG
TCGGACGATA TGGTGTTAGC GATCGGGCGT GCTGTAGAGG AAATGGTCAA ATTCGGTCAA
GAATATTAG
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| Protein sequence | MVEISSISQT LRALRRKQYS CRDLVESLVS RSESATHLNA FAATDWLHLR NEADRVDRNG
SGGVGLMGIP LCFKANIATG IFPTSAGTQG LLRHKPAIPA KIVERLHSAG ALIGASGNMH
ELSFGITNDN KTFGPARNPW NQALISGGSS GGVAVSVAAN LMLGGIGTDT GASVRLPAAL
CGVVGFRPTF GNYPTDGIVP VSPSRDTPGL IVRSVEDAVL LDRIIRNKCP TQNMSLKGLR
LGLPRSHFFD NLEPHVAAAS ERAIRRLATN QMTFVEADIP NVAELTRKVS LPVAIYEFPR
ALMAYLSFHG IGNTFDELIQ NIQDPQVYDL VQSQLSKGLI SESVYRRALR CYKPRLKATY
ENYYSSNGLD AVLFPSVPLT AKPVGLQTTL VHNGVETDTF GIFVRNLDPS SNIGLPSLSV
PVSLTPDRLP VGIQIEGPFG SDDMVLAIGR AVEEMVKFGQ EY
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