| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8279 |
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| Symbol | tnp |
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| ID | 7365238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 208159 |
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| End bp | 209580 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641847 |
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| Product | transposase |
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| Protein accession | YP_002540144 |
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| Protein GI | 222080280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATA GTGACGGCCA TTGGAGCAAG CAGGAAATAG ACGCGGGGTG TTTCAAGGAT
GTTCGCCTTG GCCGACGCTG CACAGAACTT TTACGACAGC TCGGGGAGCA CATGGGCGGC
TCTATTCCTT TCGCCTGCCA GGATTGGGCC AACACGAAAG CGGCTTATCG GTTTTTCTCC
AACCCGAATG TTGAGGAAGG CGATATCCTC AACGGTCATT TCGCCGCGAC CGCTCAGCGC
TACGATGCTT CCCAAGGTCC GATCCTGGTG CTGCGGGACA CAACTGAGTT CACCTATCAG
CGCCGTAATC CGCATGCCGT TGGCTTTACC AAGAGCGTCA ACAGTGGCCG AGACAAACAG
GAGCGGCTGC GCCACCACAC GGTCTGCGGA ATATTGATGC ATTCGAGCCT TGCTGTAACT
TTGGATGGGC TACCCTTGGG GTTGGCGGCC GTCAAATTCT GGAGCCGCGA CAAGTTCAAG
GGCACGGCCC AGCTCAAGCG CAAGATTAAT CCGACGCGTG TTCCGATCGA AACCAAGGAA
AGCATCCGTT GGCTTGAAAA TCTGCGGCAA TCCGTCGGCC TGCTTGGCCA ACCTGACCGA
TGCATTCATG TAGGCGATCG CGAAAGTGAT ATCTACGAAC TCTACTGCCT GACCAAGGAG
CTTGGCACGC ACTTCGTCGT GCGCACGGTC GTCGACAGGT TGGCTGGCAA CGGGGATCAC
ACGATATCGG CTGAAATGCG CGATGTTGAA ACTGCCGGAC GGCACCTTAT CGAAGTTCGC
GCCGATACCG ACGAGGTCAC TAAAGTCCAC CTGGATATCC GATTCAAACG GATCCGGGTG
TTGCCGCCCA TCGGCAAGAT GAAACGATAT CCTGCTTTAG ACCTGACCGT CATCCACGCG
GTGGAGCCCA ACCCTCCGCC CGGCAGCAAG CGCATCGAGT GGAAGCTACT GACCGATCTT
GAGGTACATA GCTGCGAGGA TGCCGTCGAA AAAATCAAAT GGTACGCGAT GCGCTGGAAG
ATTGAGGTCT TCCATAAGAT CCTGAAGTCG GGTTGCCGGG CTGAAGATGC AAGATTACGA
ACGGCCGATC GACTGGCAAA CCTCGTCGCC ATGTTCTGCA TTATGAGCTG GAGGGTGCTC
TGGTTGACAA TGCTCGCGCG CAGTGCGCCC GAAATACCGC CAACTGCGGC CCTCACCGAA
CAGGAAATTG AAATTCTTGA TCAAATGGTC AGCAACGCAG GTAACCGGCA GGCGACGCCG
GGATCGCTAA ACTTCTATCT CACCAAACTC GCTCGTTTAG GTGGTTACCT CGCAAGAACA
TCAGATCCGC CACCAGGAAA TACGGTCGTC TGGCGCGGTC TCAGCCGGCT GACGGACATT
CGCCTCGGAA CCGAAATCGC AGCGACACTC AGATGTGGGT AA
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| Protein sequence | MADSDGHWSK QEIDAGCFKD VRLGRRCTEL LRQLGEHMGG SIPFACQDWA NTKAAYRFFS
NPNVEEGDIL NGHFAATAQR YDASQGPILV LRDTTEFTYQ RRNPHAVGFT KSVNSGRDKQ
ERLRHHTVCG ILMHSSLAVT LDGLPLGLAA VKFWSRDKFK GTAQLKRKIN PTRVPIETKE
SIRWLENLRQ SVGLLGQPDR CIHVGDRESD IYELYCLTKE LGTHFVVRTV VDRLAGNGDH
TISAEMRDVE TAGRHLIEVR ADTDEVTKVH LDIRFKRIRV LPPIGKMKRY PALDLTVIHA
VEPNPPPGSK RIEWKLLTDL EVHSCEDAVE KIKWYAMRWK IEVFHKILKS GCRAEDARLR
TADRLANLVA MFCIMSWRVL WLTMLARSAP EIPPTAALTE QEIEILDQMV SNAGNRQATP
GSLNFYLTKL ARLGGYLART SDPPPGNTVV WRGLSRLTDI RLGTEIAATL RCG
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