| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8259 |
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| Symbol | |
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| ID | 7365224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 194083 |
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| End bp | 194823 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641834 |
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| Product | integrase/recombinase |
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| Protein accession | YP_002540131 |
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| Protein GI | 222080267 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.483567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTG ATTTTGCGCT GCTATTGCAG CGGTTCCTTA CAAGCCACCT GGCAGGACTA
CGTGGCGCTT CGCCCAACAC GGTCGCCTCC TATCGCGACA CGTTCAAGCT TCTGGTCATC
TATTTGCGCG ATCAGAAAGC GATACCGCCT GAGAAGCTTA CCCTAAACCG CATCGACGTC
GAGATGATTA CAGGGTTCCT GAACTGGCTT GAGAGCCGCC GCCAGAACAG TGTCTCGACA
CGGAACCAGC GCCTGGCGGC GATCAGTTCG TTTTACAACT GGATGCAATC GCAGGAGCCC
GCACTGATGG CGCGTTGCCA GGACATCATG GCAATCCCGG TCAAAAAGGG AGCTCAAGCC
TGCGTGCATC ATCTGACAGT TGAGCAGACG CGATGCTTGC TAAACGCACC GGATCGCACC
ACGCGCAGCG GCAGGCGCGA TGCGACAATA CTGGCCACTC TTTACGATAC CGGTGCCAGA
GTCCAGGAAC TGGTTGACCT GACCGTTCGG GATGTCCGTC TGCAAAAGCC GGCAGTCATC
ACGTTGACGG GCAAGGGTCG CAAGACCCGT CATGTCCCTC TTGGCGCCAA CACGGCAGCG
CTCCTGGCCA GCTACTTGAC CGAGTTTCGC CTCGATATGC CTGGTCGCGA TGGCTATCCG
GTATTCTTCA ACCAACAACA CGCAAAGCTT ATACCAGCCT GCGTTGAGGC TGACTCAGGT
TGTGGATTCC CAAAGCGATG A
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| Protein sequence | MATDFALLLQ RFLTSHLAGL RGASPNTVAS YRDTFKLLVI YLRDQKAIPP EKLTLNRIDV
EMITGFLNWL ESRRQNSVST RNQRLAAISS FYNWMQSQEP ALMARCQDIM AIPVKKGAQA
CVHHLTVEQT RCLLNAPDRT TRSGRRDATI LATLYDTGAR VQELVDLTVR DVRLQKPAVI
TLTGKGRKTR HVPLGANTAA LLASYLTEFR LDMPGRDGYP VFFNQQHAKL IPACVEADSG
CGFPKR
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