| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8257 |
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| Symbol | |
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| ID | 7365222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 192645 |
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| End bp | 192974 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641832 |
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| Product | integrase/recombinase |
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| Protein accession | YP_002540129 |
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| Protein GI | 222080265 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0245886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGTTG GTATTAATCG TGGCGGAGTT GCGTGGATCA TCGACAAGTA CCGAGCACTC
GCGGACACAC AAGAGCTTGC CCGAGCCAGA ATAAGCCCCC ATATTCTGAG GCATAGCAAG
GCCATGCATC TATATGAGGC TGGTATCCCG CTGCCCTACA TCCGAGATAT TCTGGGCCAT
GTGGATCTAT CGACCACCGA GATCTACGCG CGTGCTTCCA CCGAAGCCAA ACGGAAGGCT
CTGGAGGCCG CATATGTCGA CGTCATCTCC GAGGACATGC CGGAGTGGAG TCAGGACGCG
GGACTGCTTG CCTGGCTGAC ATCTTTATAG
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| Protein sequence | MQVGINRGGV AWIIDKYRAL ADTQELARAR ISPHILRHSK AMHLYEAGIP LPYIRDILGH
VDLSTTEIYA RASTEAKRKA LEAAYVDVIS EDMPEWSQDA GLLAWLTSL
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