| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8145 |
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| Symbol | |
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| ID | 7365060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 97789 |
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| End bp | 98604 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643641762 |
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| Product | transcriptional regulator IclR family |
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| Protein accession | YP_002540059 |
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| Protein GI | 222080196 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.122254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC ACGACGCGTC TCAATCAAGT CTAGGCAAGG CGGTCTTACT ATTGAAAGCT
ATTGCCAGGT CGGGGGCGGC TGGTGCCCGC CTTAAGGATA TCGCCCAAGG TATGGATGTA
AGCCTGCCGA CGGTACATCG GCTGCTGAAG ACGTTGATCA GTGAGGGCCT CGTCGAGCAA
GCGGACAAGA ACTACCGCCT CTCGTATGAA TTCTTCTGTA TGGCCGCCAA ATCCAGACAG
ATGAACAGCA TTTCCGAAGC CGCCAGACCA TCTCTGCTGC GCGTGTTCGG TATGTTGAAA
GAAGCAGTGA TATTGATCGA AAGGTCTAAG TTTGACGCGA TATGCACCGA TTGCTTCTGG
GGAAGTCATC CTATCCGAAC GTTCTATGGC GGTGTCGGAG GGCGCGTTCC ATTGGGTGTC
GGCCAAGGCG CATTGGCCAT CCTTGCGTTT CAGCCTGACG AAGAGCGTGA ACAGATCATC
CGCTTCAACA TGCCGCGTAT CGCCGCCGAA TACCCGATTG ATGAGCTTGA TCTGCGTACA
ATGATCAACG AAATCAGGGA AATGCGAGCT GCTGCGTTCG ACTTCAACAT CAACGACGGA
ATTTCTGCGA TAGCAGTTCC GATTTTCGAC CGGGCAGGGA TTGCAGTCGC CTCACTCAGC
ATTGCAGCTC CCTTGGTAAG GCTTTCGGGT CCGCGTCAAA AGACAGTAAT TGACCTTCTG
ACGAAAGAAG CACGCGTCAT TTCCAAGGCG TTGAACCCTC TTGGGCAGAT CGACGAACCT
GTTATCTGGG GTGAAGCCGC CTCCAAACTG ACTTGA
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| Protein sequence | MENHDASQSS LGKAVLLLKA IARSGAAGAR LKDIAQGMDV SLPTVHRLLK TLISEGLVEQ
ADKNYRLSYE FFCMAAKSRQ MNSISEAARP SLLRVFGMLK EAVILIERSK FDAICTDCFW
GSHPIRTFYG GVGGRVPLGV GQGALAILAF QPDEEREQII RFNMPRIAAE YPIDELDLRT
MINEIREMRA AAFDFNINDG ISAIAVPIFD RAGIAVASLS IAAPLVRLSG PRQKTVIDLL
TKEARVISKA LNPLGQIDEP VIWGEAASKL T
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