| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8142 |
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| Symbol | alr |
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| ID | 7365058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 95892 |
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| End bp | 96776 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643641760 |
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| Product | alanine racemase |
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| Protein accession | YP_002540057 |
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| Protein GI | 222080194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.170675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACGG TGAGACCGAA CGATCTGCAC ATCGAGGACG CTTGCGTTGT TGGGGGCGCA
TCGGGGTATC TGACGATCGA TCTCGGCGCT CTCAGCAGAA ACTACGAGCT GCTGGCCGGT
ATGGCCGCAC CTGGAAATAC CGCTGCGGTC GTCAAGGCAG ATGCCTATGG GCTCGGAGCA
GAGCGCGTCG CGAGGACCTT GTATGCCAAG GGCTGCCGGC ATTTCTTCGT TGCCCAGTTC
ATCGAGGCGA CCAGGCTGCG CCCTGCCCTT TCGTATGATG CCCGCATCTT CGTTCTTAAT
GGACTGCAGC CTGGCAACGA GGATGTATGC GCCTACGAAA ACATCGTTCC GGTCATCAAC
TCGATGGACC AGTGGCGAAA CCGGAACAGG ACCGCGCGCC GTCTCGGCCG CCGGCTTCCC
ATAGTGGTTC AGTTTGACAC CGGAATGTCC CGGCTCGGCC TGCCGCCGGA AGAGCGTCCC
CTGCTTGCCG AGGCGGTCGC GCAAGGATCG GACGTCGATA TCCTCTTCCT AATGAGCCAT
CTGGCCTCCG CCGACGACGA GAAAAGCGCG CAGAACGGCG AGCAGCTTGA GGAGCTCCGA
AAGATCGCCG CCGAATTTCC GGGTTACGAC CTGTCGTTTG CCAATTCCGG CGGCATCTTT
CTCGGCGACG ACTATCGCGG TCTCCTCGCC CGGCCCGGCA TCGCGCTCTA TGGCGGAGCA
CCATCCGCTG CGCGCAATCC GATGGAAGCC GTCGTCCGGC TCGACGTCGC CGTCGTGCAG
ACTAGAACCG TGCCGGGCAG CACGAAAGTC GGCTATGGCG GAGCGCATGT CACCACACGT
GAGACGCGCC TTGCCACGAT CGCCGCAGGC GAGTGCGATG TCTAA
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| Protein sequence | MHTVRPNDLH IEDACVVGGA SGYLTIDLGA LSRNYELLAG MAAPGNTAAV VKADAYGLGA
ERVARTLYAK GCRHFFVAQF IEATRLRPAL SYDARIFVLN GLQPGNEDVC AYENIVPVIN
SMDQWRNRNR TARRLGRRLP IVVQFDTGMS RLGLPPEERP LLAEAVAQGS DVDILFLMSH
LASADDEKSA QNGEQLEELR KIAAEFPGYD LSFANSGGIF LGDDYRGLLA RPGIALYGGA
PSAARNPMEA VVRLDVAVVQ TRTVPGSTKV GYGGAHVTTR ETRLATIAAG ECDV
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