Gene Avi_8075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8075 
Symbol 
ID7365183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand- 
Start bp51718 
End bp52392 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID643641722 
Producthypothetical protein 
Protein accessionYP_002540019 
Protein GI222080156 
COG category[S] Function unknown 
COG ID[COG4683] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.712439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCGA CGGCCTCCTC CCAGTGCCAT CGCATCAGCT GTTCCCCCCT GGAGGTTTTA 
ACCTTCACAC TTCAAGGGCC TCGGTTTTCC GGTGGCCCTA TTTTTTGCCT AGTAATCGGC 
CGACTTGCGG AGGCCGCATC GAGAATCCAT CTCGCTCCTA AGCAGGTACA GATGACAAAC 
TCGCTGGAAT CGATTGAGAT CGCAGACACT TGCAACTTAG TATCGTCGTC ACTTGCCAGT 
CGAAAGCGAT CGAGTTATTC CATCTGTGGA ATATCGCTTG AAATATTCCA CAGATGGAAT 
ACATTTGGAG CATCGATGAG TTGGAGCGTT GAATATACCG ATGAGTTTGG TGAGTGGTAC 
GCGACGTTGG TCGAAGCCAT TCAGGACGAT ATTGTAAGGG TGGTCGGGCT TCTCGAAGCC 
AAAGGACCCC AACTCCCCTT CCCATACTCA TCCGGCATCG AAGGCTCCAG GCACGAACAT 
ATGCGGGAAT TGCGGATTCA GAGCGGTGGT GAACCCTACC GGGTATTCTA CGCTTTCGAT 
CCGCGTCGCA CCGCTATTTT GCTGGTCGGT GGAAATAAAA CCGGCGACGA CCGCTTTTAC 
GAAATCATGA TTCCGGTCGC TGATCGCCTA TATGACAATT ACCTGATCGA GATCGGGAAG 
GAAGGGTTGA TATGA
 
Protein sequence
MHATASSQCH RISCSPLEVL TFTLQGPRFS GGPIFCLVIG RLAEAASRIH LAPKQVQMTN 
SLESIEIADT CNLVSSSLAS RKRSSYSICG ISLEIFHRWN TFGASMSWSV EYTDEFGEWY 
ATLVEAIQDD IVRVVGLLEA KGPQLPFPYS SGIEGSRHEH MRELRIQSGG EPYRVFYAFD 
PRRTAILLVG GNKTGDDRFY EIMIPVADRL YDNYLIEIGK EGLI