| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8050 |
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| Symbol | traA |
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| ID | 7365168 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 36152 |
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| End bp | 39445 |
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| Gene Length | 3294 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.481036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCATCG CCCATTTCTC AGCCAGTATC GTCAGCCGTG GCGACGGCCG CAGTGCTGTG
TTGTCTGCGG CCTACCGGCA TTGCGCGAAA ATGGAATATG AGCGCGAGGC CCGAACCATT
GATTATACCC GCAAGCAAGG CCTCGTGCAT GAGGAGTTCG TTCTACCCGC GGATGCCCCG
AAATGGGTCC GCTCCCTTAT CACCGATCGC TCTGTATCGG GAGCGGTCGA GGCCTTCTGG
AACAAGGTCG AGGCCTTCGA GAAGCGCTCC GATGCGCAGC TTGCCCGCGA CCTGACCATC
GCACTTCCGC TGGAGCTGAC GACTGACCAA AGCATCGCAC TGGTACGCGA CTTCGTGGAA
AAGCACATCC TTGCCAAGGC AATGCTCGCC GATTGGGTCT ACCACGACAA TCCCGGCAAT
CCTCACATCC ATCTGATGAC CACATTGCGC CCGCTCACCG AAGATGGCTT TGGGGCAAAG
AAGGTCGCGG TCATTGGTGA GGATGGCCAG CCGGTCCGCA CCAAGTCCGG CAAGATCCTT
TACGAACTCT GGGCCGGTTC CACCGACGAC TTCAATGTCT TGCGCGATGG CTGGTTCGAA
CGCCAGAACC ATCACTTGGC GCTCAGTGGT CTCGATCTTC GTGTCGATGG CCGCTCCTAC
GAGAAGCAGG GCATAGACCT GGAGCCGACC ATCCATCTCG GCGTTGGCGC AAAAGCGATC
GAGCGCAAGG CCGAAAGCCA AGGCGTGCGT CCGGGGCTCG AGCGGATTGC TGAATGCGCA
GCGTCGAAGC GAGAACACCC GTCGAATTCT GCGACGCCCG GAGATCGTCC TCGACCTGAT
CACCCGGGTG AAAAGCGTTT TCGATGAGCG GGATATCGCC AAGGTGCTGC ATCGCTATAT
CGACGATCCC GGCACGTTTC AGCATTTGAT GGCGCGCATC ATCCAGAGCC GGGATATTCT
GCGCTTGCAG CGCGATACGA TCGATTTCAC CACCGGCGAC AAGATGCCGG CCCGCTACAC
AACACGGGCG ATGATCCGGC TGGAAGCAAC GATGTCGCGC CAAGCGATCT GGCTGTCGAG
CCGTGAACGG CATGCGGTAT CGGAAGCAAT GCTGGATGCG ACGTTCCGAC GTCATCAGCG
GCTTTCGGAA GAGCAAAGGA TGGCAATCGA ACGGATCGCT GACCCCGCCC GGATCGCTGC
CGTCGTCGGA CGCGCTGGTG CTGGCAAGAC CACGATGATG AAGGCGGCGC GAGAGGCTTG
GGAGCTCGCC GGCTATCGCG TTGTCGGCGG CGCGCTTGCG GGCAAAGCGG CCGAAGGCTT
GGAGAAGGAA GCCGGCATTC AAAGCCGGAC GTTGGCGTCC TGGGAATTGC GCTGGGGCCG
TGGCCGCGAC ATGCTCGATG ACAGGACCAT CTTCGTCATG GACGAGGCCG GCATGGTCGC
CTCCAAACAG ATGGCGGGCT TTGTCGATGT CGTTGTGAGG GCAGGGGCGA AAATCGTGCT
GGTCGGCGAT CCCGAGTAGC TTCAGCCGAT CGAGGCGGGG GCTGCCTTCC GCGCCATTGT
CGATCGGATA GGTTACGCTG AACTCGAGAC AATCTATCGC CAGCGCGAGG ACTGGATGCG
CAAGGCATCG CTCGATCTGG CGCGCGGCAA TGTCGAGAAG GCGTTGGCGC TCTACAATGC
CAATGCGAGA ATTGTTGGCG AACGTCTGAA GGCGGAAGCG GTTGAGCGCC TGATCGCCGA
CTGGAACCGT GATTACGATC AGACGAAGAC GACATTGATC CTCGCCCATC TGCGCCGCGA
CGTGCGCATG CTGAACGTTA TGGCCCGCGA AAAACTCGTT GAACGCGGAC TTGTCGGTGA
GGGCCATGTC TTCAAAACGG CTGACGGTGT CAGGCAGTTC GACTTGGGCG ACCAGATCGT
CTTCCTGAAG AATGAGACCT CGCTCGGCGT CAAGAACGGC ATGATCGCTC AGGTCATTGA
GGCCGCACCG AACAGGATCG TTGCTATCAT CGGAGAAGGT GATCAGCACC GGCAGGTGAT
CGTCGAACAG CGGTTCTACA ACAATCTCGA TCACGGCTAC GCCACGACGA TTCACAAGTC
CCAGGGTGCC ACGGTCGATA GGGTCAAGGT GCTCGCTTCC CTGTCCCTTG ATCGGCATCT
AACCTATGTG GCGATGACCC GCCATCGCGA GGATCTGCAG CTCTATTACG GGACCAGATC
CTTCTCCTTC AACGGCGGCC TGGCCAAGGT TCTTTCCCGA AAGAACGCCA AGGAGACGAC
GCTCGATTAC GTGCGTGGGC AGTTCTATCG CGACGCGCTG CGCTTCGCCG AGGCTCGTGG
CCTCTACGTC GTCCAGGTCG CACGCACGAT GGTACGCGAT CGGCTCGACT GGACGCTGCG
CCAGAAGGCC AAACTTGTCG ATCTCAGCCA GCGCCTTGCT GCCTTTGCCG CGCGCCTTGG
CTTCACCCAA TCCCCAACCA CTCAAACGAA GAAGGAGGCC GCACCCATGG TCGCAGGCAT
CAAGATATTC TCCGGTTCTG TTGCGGATAC GGTCGGTGAC AGGCTCGGCA CAGATCCCGC
CCTGAAGCAG CAATGGGAGG AGGTGTCGGC GCGCTTCCGT TATGTCTTCG CCGATCCCGA
AACCGCATTC CGGGCCATGA ACTTCGATAT GGTCCTGGCC GACAGGGAGA TGGCCGGACA
GGTCCTTCAA AAGCTTGAGA CAGACCCCGC ATCGATCGGC CCGCTGAAGG GCAAGACCGG
AATCCTCGCT GGCAAGGCCG AGCGCGAGGC GCGCCGCGTC GCAGAGGTCA ATGTTCCCGC
CCTGAAACGC GATCTCGCGC AATATCTGCG GATGCGCGAG ACCGCGACGC AACGCGTTGC
GACTGAAGAA CAAGCCCTGC GCCAGCGCGT CTCGATCGAC ATCCCGGCGC TCTCGCCGGC
CGCACGCTTG AGCGCGTGCG CGACGCGATC GACCGCAACG ATCTGCCAGC GGCCATGGCA
TATGCGCTCA GCAATCGCGA GACCAAGCTC GAAATCGACG GGTTCAGCCA GGCTGTTACC
GAACGCTTCG GCGAGCGGAC CCTGGTGAGC AACGTGGCGC GCGAGCCGTC CGGAAAGCTG
TACGAAAAGC TTGCCGAGGG GATGAAGCCC GAACAGAAGG AGCAGCTGAA GCAAGCCTGG
CCGGTCATGC GCACGTCCCA GCAGCTCGCC GCCCACGAGC GCACGAGCCA GACGCTGAAA
CAAGCTGAAA ACCTGCGGCT GACGCAGCGC CAGTCGCCGG TGATGAAGCA GTGA
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| Protein sequence | |
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