Gene Avi_7569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7569 
Symbol 
ID7380099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp513930 
End bp514610 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content55% 
IMG OID643641581 
Producthypothetical protein 
Protein accessionYP_002539878 
Protein GI222102839 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGA AGCCACAGAT CGTGCTTGCC GTTGATGTCG GCGGGTCGCA TGTGAAAATC 
ATGAACAGTG TTGACGGCGT GGAAAGCAAG GCTGTCTCGG GTCCTGAAAT GGATGCGGCC 
GCAATGGCCG AGGCAGTCGA GACACTTGCG TCAGGCATGG ATTATGACGT TATCGCCATT 
GGTTATCCGG GTCCGGTTGT TCACAATCGT ATTTTGACGG AGCCGCATAA CTTAGCCGCT 
GGATGGACAG GTTTCGATTT CGCAAAGCGG TTCGGCAAGC CCGTGCGCAT TGTCAACGAT 
GCTCTGATGC AGGCTATGGG AAGCTATGAT GGCGGACGTA TGCTGTTTCT CGGCCTTGGC 
ACCGGCCTGG GAGCGGCCAT GATCGTCAAC TACGTCACCC AACCCATGGA ACTGGCGCAT 
CTTCCCTATC GAAAAGGCCG CAGCTATGAG GACTATCTCG GCCAAGCGAG CCTGAAAGAG 
CGCGGGCACA GGAAATGGGA GAAACATGTG TTGAGGGCTG TAGAGCAACT CAGCGCGGCA 
CTGGAGCCGG ACTATGTTGT CATCGGCGGC GGCAATGTCA CTAAGTTAAA AACGCTTCCG 
ACCAATGCCC GTCACGGCGA TAACGCCAAT GCATTCAAAG GCGGATTTGC TCTGTGGCTG 
GATTCCCGGT TCCAGACTTG A
 
Protein sequence
MDEKPQIVLA VDVGGSHVKI MNSVDGVESK AVSGPEMDAA AMAEAVETLA SGMDYDVIAI 
GYPGPVVHNR ILTEPHNLAA GWTGFDFAKR FGKPVRIVND ALMQAMGSYD GGRMLFLGLG 
TGLGAAMIVN YVTQPMELAH LPYRKGRSYE DYLGQASLKE RGHRKWEKHV LRAVEQLSAA 
LEPDYVVIGG GNVTKLKTLP TNARHGDNAN AFKGGFALWL DSRFQT