| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7546 |
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| Symbol | aceF |
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| ID | 7380082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 489584 |
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| End bp | 493573 |
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| Gene Length | 3990 bp |
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| Protein Length | 1329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643641564 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_002539861 |
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| Protein GI | 222102822 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3831] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.222073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGCT ACGAACTCGT TGAGGGCACA TCATCGAAAT TCTGGCAGGT CTCGCTTGAC
GGAACGACCC TGACGGTCAC CTACGGGCGC ATCGGTACCC AGGGCCAGAC GAAGGAAAAG
GAATTCGACA GCGTCGATGC GGCGATCAAG GAAAAGAACA AGCTGGTTAA GGAGAAGACT
GGCAAGGGCT ATGCCTTGAG CGGATCTGGT CCCGCGCCCG TCAAGACCGC CACACCCAAG
CCAAAAGCTG CCGAAAAGAA GGAAATGCCG GTGCAGCAGG CGGCTGCGCT GGCGCTGGCC
GAGCGCCCCG TGACGTCAGC GGAAGCGCCA GCAGCAGCAG TCCCACCAGA GGCGCCCGCC
GAACCAGCCC CCGCCCCTTT GGTGATCGAG TCTTCCGAGG AGCTGGAAAA GCTGCTCGGC
GATCCCCTTC CGACGCGCAC TGAACCGCAG ACGACATACT ATCTGGAAGC AGATGCTTGG
AAAGCACTCC GGAACACGCT CCAGGTCACG CTTCCCAAGG CCACCGAGAA GGAAAAGGCA
TCGGCTCAAT GGCTGGAAGA GCGTCTCGGT GAGGACGGTC CGAAGGCACC CGCTGGCGGT
GGTGCGGTCG GCTGGCTAAA ATCCAAGCTC GGCGGCAAAC AGGAAGCATT CATGGGCGTC
GAAGAAGCCC GTACCTGGAT CACCCACATC CTGAACGCGA CGAATCGGCT GTCGATTACC
CTAGGTGGGG GCGATGAAAA AAGTCGCCCG GTCGACCTGT TGTGCCTAAG ATACTTCTTC
CATTGGCTGG CGCGAACATC TGGAGCGCCA ATCGTCGCAG AAGCGGCACT GCCGCTTGTC
GGCACCGAAA ACCAGGCGCG CCGCAGCTAT GAAAATTCCG CCTGGAGCTC GGCCCTGTCG
CTTGCCTTGC GCGACGCCCT TGTGAAGGCT CCGGCGGAGG AATACGAACA GGTCGTCGAT
GTCTTCATGC AGGCTTGCGA TGAACAGGTG GATTGGAAAC GTCGCGCCTA TTTTGCCTTC
GTGCTCGGCG ACGACAGGGT CGGCGAACAT GATCTGAAGG CACTCGCAGT CCTGAACGGT
GCAGCCGTCA GCGGTCTCGA TGTCGGTGCA ACCTTGGAAA TGGTGCCGCT GATCGCCGAG
GCGCCGCCCT CTGCCGTCGT GCGCTGGCGG ACGAAACGCA CCTATTTCAT CTATTACACC
TATTTCGACC TGCCTCTCGA AGACATCGCA GCTACCGTCA TTGGCGCTGC CGATCTCTAT
CGCGAGTCAG CCCTGCCCGC GCTCGAATGG CTGTTGCACT ATGCCTACGA TGCACAGCGG
ACGCTCGTGG CGCGCATCGT GCTGGCGACC GGCGAAGACG CAGCGCTCGG CCTGCTGCTT
CCCTTCTTGC ATGAGAAATG GATCCGCGCC GCCCTTGACG AGGCGACCGA AGCCAATCCC
GCGAATGTCT TCCGGCAGTA TGTCACGTCG CTCGCTGCCG GCCGTAGCGA TCCGGTTATC
CGCTCGCGCG TTCTAGACAT GACGAAGCGC TATCCTGCCG ATACGCTGAA GCAATGGCTG
CAAGGCAACA ATAAAGCACT GAGCCAGCTC GACCGCCTGT TGGAGGCGCA GAATGTGACG
CTCGCCGGGA ACGATGCGCT GCCTGCGGTT CTGCAAGACC CGCCATGGCG CAAGAAGGCG
AAGAAGAGCG ACGATCTCGT CCTTTCGCTC AAGCCGGCTG AGACACAATT CCGCTACGAG
CCCGATGGGC CTCCCGGCCA CGAAAACCAC TGGCGGATAT CCCAGGCGAA GGTTATCGCC
AATACCGACG AACTGATCGA ACTGATCACG GAATTCGAAG CCAAGCCCTT CCCGGACTGG
TACGGCGTTC CGGCCCGATC GAGGCCTTTG CCCCAGCGCG GTGACGACGA AGGCGACGTG
CTAGGCTTTA TCTACGAGCG CGTGATGCAG ATTCATCGTG CGAAATCCTA TGCGATCAAT
TCAAGTGGCT GGAACACGCT TTTTGCCGGT ATCGACCGTC AACCGGATGC GTTGGCACTG
GTGCTGTGGA GCTGCCCGGG TGTCGCGACC GGTTATTTCG CCGATGACGT CTATCCACGC
ATGATGGCCC GTTTCGGCGA GCGCGGCCTG CCGGGCCTTC TGAGGCAGAT TGAAGGTGAT
CCTATCGGCA TGATTGACCG CGCCAAGGAT GTCGACGCCT CGGAAATTGC GCCGCATGCG
GCCCGCGCCC TGCTCAAGCT CAAGAAGGCT CGTGTTCCGG CCATGCAATG GCTGCGCACG
CACCGGCAGA CGGCAGTGAC CCGGCTGATC CCCGACGCCG TCGGCGACAA GGGCATTGCG
CGCGAGGCCG CCGAGCATGC CTTGCGCTGG ATCGCCGGCG ATCGCAACGA TGGACGCGCG
GCGATTGAAG CCGTGGCCCA AGACTATACC ACCCAGGACG CCAAGGTGCC CGAGGCGGTT
TCGGAGGTTC TTGATCGCGA TCCGCTGCAG CGCTATCCGG CGCGCATTGC CAAGCTGCCC
ACCTGGTTCA AGCCGGCGGC GATGACGCGA CCGTTGCTGA AGCAGGGCGG CGCTTTGTCT
GACGAGGCTA TGGCCGCAAT CGCCGAAATG CTGTCCTTCA GCACGCCGGA GGGGATTTAC
GGCGGCATCG ATATCGTCAA GGAGTTCACC ACGCCGGAAA GTCAGGCAGG ATTCGCCTGG
GACATGTTTG CCGCCTGGCT GGCCGATGGC GCTCCCTCCA AGGATGGCTG GGCGCTCAGG
GCCGTGGGCT GGATGGGCGA CGACGAATGC GCCCGCAAGC TGACCCGCCT GATCCGCAAA
TGGCCAGGCG AGGCCGCCCA CGCACGCGCC GTGACGGGCC TCGACGTGCT TGCCGACATC
GGCACCGACG TGGCACTGAT GAACCTCAAT GGCATCGCTG AAAAATTGAA GTTCAAGGGC
CTGCAGGAAA AGGCCCGTGA AAAAATCGCG GTGCTGGCCG AAGCCCGCGA GCTGACGCCG
GAAGAACTGG CAGACCGGCT GGCGCCCGAT CTCGATCTCG ATGATCGCGG CGGCATGGAT
CTCATCTTCG GCGACCGGCG CTTCCGCGTC GGCTTCGACG AATTCCTCAA GCCCTGGGTG
AAGGACGAGA CCGGCAAGCG GCTCAAGGAC CTGCCGAAGC CGATCAAGTC GGACGACCAG
GAACTGGCGG CGGAGGCAAC CAAGCGCTGG GCAGCGCTAA AAAAGGATGC CCGCGCCATC
TCCAGCCTGC AGATCACACG GCTGGAAAAC ATGCTGTCCA CATCGCGCCG CGCCGCGCCG
GAGGTGTTCT GGACCTTCTT TGCCAGCCAT CCGCTGATCG GTCACCTGAC CCAGCGACTT
GTATGGGGAG TGTATGCCGA CCATGATCCC TCCACTGCGC CGACGACGAT CTTCCGGGTC
TCTGACGATC TGTCCGTCAC TGACGCGCAG GACGAGACGC TCGATCTCGA TTTCTCGGCG
CAGGCGACAG GCTTCATCGG GACCGTGCAT CCGCTGCATC TGCCAGCAGG CGGGCTCGAT
GCCTGGGGAG CGCTGTTCGG CGATTATGAG ATCTCACAGC CCTTCCCGCA GCTCGGCCGC
GAAATCCACC TGCTGCTGGA GACCGAGAAG GATACCAGCG AAATCAGCCG CTTCGAGGGC
CTAAAAGTCG AGTCTCCGCG GCTTAGGGGA ATGGCCGCGC GCGGCTGGCG GCTCGGCGCA
CCCCAGGATA GCGGCTGCAT CTGGTGGCTG GAGCGGCCTG TACAGTTTCC CGACGGCAGC
ACGCATGCCG CGATGTTCTA TTTCTCCGAC GGCATCTTTA CCGGTGGCGG CGATTGGGAG
GACAAGGAGC AGACCCTTGG CAAACTATCG CTAGAACAGC CCTATGCACG CACCAAGACC
AGCGAGCGCA AGTTCGACGA GCTTGATGCG GTGACCGTCA GCGAATTGCT GCGCGGCCTG
GCGCTGTTGG CCGAGACGGC TGTGAAATGA
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| Protein sequence | MERYELVEGT SSKFWQVSLD GTTLTVTYGR IGTQGQTKEK EFDSVDAAIK EKNKLVKEKT
GKGYALSGSG PAPVKTATPK PKAAEKKEMP VQQAAALALA ERPVTSAEAP AAAVPPEAPA
EPAPAPLVIE SSEELEKLLG DPLPTRTEPQ TTYYLEADAW KALRNTLQVT LPKATEKEKA
SAQWLEERLG EDGPKAPAGG GAVGWLKSKL GGKQEAFMGV EEARTWITHI LNATNRLSIT
LGGGDEKSRP VDLLCLRYFF HWLARTSGAP IVAEAALPLV GTENQARRSY ENSAWSSALS
LALRDALVKA PAEEYEQVVD VFMQACDEQV DWKRRAYFAF VLGDDRVGEH DLKALAVLNG
AAVSGLDVGA TLEMVPLIAE APPSAVVRWR TKRTYFIYYT YFDLPLEDIA ATVIGAADLY
RESALPALEW LLHYAYDAQR TLVARIVLAT GEDAALGLLL PFLHEKWIRA ALDEATEANP
ANVFRQYVTS LAAGRSDPVI RSRVLDMTKR YPADTLKQWL QGNNKALSQL DRLLEAQNVT
LAGNDALPAV LQDPPWRKKA KKSDDLVLSL KPAETQFRYE PDGPPGHENH WRISQAKVIA
NTDELIELIT EFEAKPFPDW YGVPARSRPL PQRGDDEGDV LGFIYERVMQ IHRAKSYAIN
SSGWNTLFAG IDRQPDALAL VLWSCPGVAT GYFADDVYPR MMARFGERGL PGLLRQIEGD
PIGMIDRAKD VDASEIAPHA ARALLKLKKA RVPAMQWLRT HRQTAVTRLI PDAVGDKGIA
REAAEHALRW IAGDRNDGRA AIEAVAQDYT TQDAKVPEAV SEVLDRDPLQ RYPARIAKLP
TWFKPAAMTR PLLKQGGALS DEAMAAIAEM LSFSTPEGIY GGIDIVKEFT TPESQAGFAW
DMFAAWLADG APSKDGWALR AVGWMGDDEC ARKLTRLIRK WPGEAAHARA VTGLDVLADI
GTDVALMNLN GIAEKLKFKG LQEKAREKIA VLAEARELTP EELADRLAPD LDLDDRGGMD
LIFGDRRFRV GFDEFLKPWV KDETGKRLKD LPKPIKSDDQ ELAAEATKRW AALKKDARAI
SSLQITRLEN MLSTSRRAAP EVFWTFFASH PLIGHLTQRL VWGVYADHDP STAPTTIFRV
SDDLSVTDAQ DETLDLDFSA QATGFIGTVH PLHLPAGGLD AWGALFGDYE ISQPFPQLGR
EIHLLLETEK DTSEISRFEG LKVESPRLRG MAARGWRLGA PQDSGCIWWL ERPVQFPDGS
THAAMFYFSD GIFTGGGDWE DKEQTLGKLS LEQPYARTKT SERKFDELDA VTVSELLRGL
ALLAETAVK
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