| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7509 |
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| Symbol | nocP |
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| ID | 7380055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 458014 |
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| End bp | 458790 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641537 |
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| Product | ABC transporter nucleotide binding/ATPase protein (nopaline) |
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| Protein accession | YP_002539834 |
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| Protein GI | 222102795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.732816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACG TCTTGAAAGT TCACGACCTC GTTAAAGCGT TTGGCTCTGT CAACATCCTC
AACGGAATCA ATTTCCGCAT GCGGGAAGGA GAGGTTATTT CGCTCATCGG CTCTTCCGGC
TCCGGCAAGA GCACGGCGCT TCGCTGCGTG AACTTTCTTG AAACGCCAAC ATCGGGCCAG
ATCGAGGTGA TGGGAGAGGC TATTTCGGTC ATCACCAATG AGCGTGGCGA ACGGGAGATC
GTCAACGCCT GTAACATCAG GGAGTTTCGT CGTCGTATCG GCATGGTGTT TCAAAGCTTC
AATCTTTGGC CGCATCGCAC GGTTTTGGGC AATGTTACGG AAGCCTTGAT CTATGTGCTG
AAAAAACAAA AGCACGAAGC ACAAGAGATG GCGCTTTCTG CGCTTTCCAA AGTCGGAATG
GTGGATTTCA GGGATCGCTA TCCCCACCAA CTCTCCGGTG GCCAGCAGCA GCGTGTGGCG
ATTGCGCGGG TGCTGGCAAT GGCTCCCAAG CTGATGTTGT TTGATGAACC AACATCGGCA
TTGGACCCCG AATTGGTCGG GGAAGTGCTG AAAGTCATCA GAACTCTGGC GGATGAAGGC
GCAACCATCC TTCTCGTCAC CCATGAAATG CGGTTCGCGC GTGATGTCTC GAACCGAATG
ATCTTCCTGC ACAAAGGCAT CGTTGAGCAG GATGACACGC CGGAAGAGCT GTTTCGCAAC
CCCGCATCCG GGGCGGTGGA GCGGTTTCTA TCCAGCGTCA TGCCGGCCGC CGCTTAA
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| Protein sequence | MTDVLKVHDL VKAFGSVNIL NGINFRMREG EVISLIGSSG SGKSTALRCV NFLETPTSGQ
IEVMGEAISV ITNERGEREI VNACNIREFR RRIGMVFQSF NLWPHRTVLG NVTEALIYVL
KKQKHEAQEM ALSALSKVGM VDFRDRYPHQ LSGGQQQRVA IARVLAMAPK LMLFDEPTSA
LDPELVGEVL KVIRTLADEG ATILLVTHEM RFARDVSNRM IFLHKGIVEQ DDTPEELFRN
PASGAVERFL SSVMPAAA
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