| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7473 |
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| Symbol | |
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| ID | 7380031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 432816 |
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| End bp | 433775 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641515 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002539812 |
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| Protein GI | 222102773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0461677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCC GGACTTTTAC ACGTAGAACC ATCAATGCAG CCTTGGCTGT CACGGCCCTT
ACCGGTCTGA GCCTCACGGC AGGAATTGCC AATGCTGCGC AAAAAACCTT TGCGCTGGTG
CAGATCAATC AACAGGCACT GTTTTTCAAC CAGATCAATC AGGGTGCACA GAAGGCCGCT
GATGCGGCGG GCGCAAAACT GGTAATCTTC AATGCCAACA ATGACCCTGC GGCCCAAAAC
AGCGCCATCG AGACCTATAT TCAGCAGAAG GTGGACGGCA TTGCCGTTGT GGCCATCGAC
GTCAACGGCA TTATGCCAGC GGTCAAACAG GCAGCGGATG CAGGCATTCC GGTGGTCGCC
ATCGATAGCA TTCTGCCTGC TGGCCCCCAG AAGGCACAGA TCGGCGTCGA TAACGCCAAG
GCGGGTGCCG ATATTGGCAA ATTCTTCGTC GATTACGTCA AGAAGGACAT GGGCGGCAAA
GCCAAGCTGG GCGTTGTGGG CGCGCTGAAC TCCTTCATCC AGAATATCCG CCAGAAGGGC
TTTGAAGACA CCATCAAGGG CGTCTCCGGC ATCACGTCGG CAGGTGTGGT TGATGGCCAG
AACGTCCAAG ACAATGCGCT GGCAGCGGCT GAAAACCTGA TCACCGGCAA TCCGGATATG
ACGGCAATCT ATGCCACGGG CGAGCCAGCG CTGCTGGGTG CCGTTGCCGC CGTGCAAAGC
CAGAGCAAGC AGGACAGTAT CAAAGTGTTT GGCTGGGATC TGACCGCTCA GGCGATTGCC
GGTATTGACG CCGGTTATGT TGCCGCGGTG ATCCAGCAGG ACCCGGCAGC CATGGGTGAA
GCGGCTGTAA AAGCGCTGAA GACCATCTCG GACGGCGGCA AGGTTGAAAA GACCATTGCC
GTGCCGGTCA CCATCGTCAC CAAGGCCAAT GTTGAGCCTT ACCGGGCCGT GTTCAAATGA
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| Protein sequence | MMTRTFTRRT INAALAVTAL TGLSLTAGIA NAAQKTFALV QINQQALFFN QINQGAQKAA
DAAGAKLVIF NANNDPAAQN SAIETYIQQK VDGIAVVAID VNGIMPAVKQ AADAGIPVVA
IDSILPAGPQ KAQIGVDNAK AGADIGKFFV DYVKKDMGGK AKLGVVGALN SFIQNIRQKG
FEDTIKGVSG ITSAGVVDGQ NVQDNALAAA ENLITGNPDM TAIYATGEPA LLGAVAAVQS
QSKQDSIKVF GWDLTAQAIA GIDAGYVAAV IQQDPAAMGE AAVKALKTIS DGGKVEKTIA
VPVTIVTKAN VEPYRAVFK
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