Gene Avi_7458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7458 
Symbol 
ID7380480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp424178 
End bp424789 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID643641508 
Producthypothetical protein 
Protein accessionYP_002539805 
Protein GI222102766 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGA CACTCATTTT GAAAAGCATT GTGCTTGGCC TTGCTGTCGC AGCCCCGCTC 
GGCCCCATCG GCGCCTTGTG CATCAACCGG ACTCTTGAAC GTGGGTTCTG GGCCGGGGTG 
GCGGGCGGCT TTGGGACTGC TCTGGCGGAT GCCGTCTACG CCAGTCTCGC TGCGCTTGGC 
TTTTCCGCTT TCGCGGCGAC CCTTGCGACA ATCGATACGC CGCTCAAAAT CATCGGTGGA 
CTTTTCATGG TGTGGCTCGG CTGGAAAAGC CTGAAGCCCA AACCTCTCGC GGACGCGGCC 
AAGGTCGGAG CGCGCGATCT TTTCGGTACC ATCGCTGCAA CCTTTTTCCT GACGATTACC 
AACCCTGTGA CCATTCTGTC CTTTGCTGCA ATTTTTGCCG GTCTTGGCCT TGCTGACGCA 
TCGGGGACGA CAAATGCGTT TTTCGTGGTC GCAGGCGTTT TCCTTGGCTC GTTGCTGTGG 
TGGTTCCTAC TGAGTGGCGG CATTGCATTG GCGCGACAGC GTCTTCCCCC AAGTTTTGCC 
CGCTGGGTTT CCTGTTTGTC TGGACTGATA CTGATCTCGT TCGGACTTTT TGCCCTCGGT 
TCAATCGCTT GA
 
Protein sequence
MELTLILKSI VLGLAVAAPL GPIGALCINR TLERGFWAGV AGGFGTALAD AVYASLAALG 
FSAFAATLAT IDTPLKIIGG LFMVWLGWKS LKPKPLADAA KVGARDLFGT IAATFFLTIT 
NPVTILSFAA IFAGLGLADA SGTTNAFFVV AGVFLGSLLW WFLLSGGIAL ARQRLPPSFA 
RWVSCLSGLI LISFGLFALG SIA