Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7455 |
Symbol | |
ID | 7380478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 421804 |
End bp | 422682 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643641506 |
Product | hypothetical protein |
Protein accession | YP_002539803 |
Protein GI | 222102764 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.652021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTCGA CTATGAAGCT TGCGACAGCG CCCGACGCCT GGGGCGTCTG GTATGCAGAC GATCCGCGAC AGACCCCTTG GGAGCGCTAT CTGGACGAGG TACGAGACTC CGGCTTCACA GCGACAGAGA CCGGGCCTTG GGGCTATCTG CCCACCGATC CATCTCATTT GACAGATGCC CTCGGTAGCC GTGGATTGAG CGTATGCGGA TCAGCCCTTG TACACCTGCT TGCCCCCGCA GACGCCATGG AAACCCTGCG CCCAAGGCTT GAGCAGACCT GCGGTCTTTT GAAAGCCATG AAGGCTGAGT GGGTGGTGCT GATGGATGAT TCAGACCTGC CCCTCCCCGG CCAAAGCCGC GCGCTTTCCC CGCACGACTG GGCATCGATG ATCCGCAACA TCAAGGATGC GGCCCGTTAT GTCACGGAAG AGCATGGACT TTCTTTTGTT TTTCATCCGC ATGTCGGCTC CGGCGTGGAA ACGGAGGCCG AAGTCATCCG CCTTCTGGAA GAAACGTCGG AAGATAGCGT CGGCCTTTGC TTCGATTTTG GTCATCACGC CTATACCGGT GCCGATGCCG TGGCTTTTAT GAAGCGCTAT GCGGACCGTA TTCCCTATTA CCACTTCAAG AATGTAGATC CCGTTTTGCT GGCGCATATA CGCCAAAACA ACATCAACTT CATTGAGGGC TTCCAGTCGG GCGTTATGTG CGAGCTGGAC AAGGGCATGG TGGATTTTGC AGAGGTTCGG GATTTTCTTG CAACCCGTGG GTTTGATGGC TATGCCGTTT ATGAACAGGA TATGTATCCC TGCCCTCCGG AGAAGCCTTT TCCGATTGCG TGCCACAACC GGCAGGTCTT GCGTGAGCTT GGGATTTAA
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Protein sequence | MESTMKLATA PDAWGVWYAD DPRQTPWERY LDEVRDSGFT ATETGPWGYL PTDPSHLTDA LGSRGLSVCG SALVHLLAPA DAMETLRPRL EQTCGLLKAM KAEWVVLMDD SDLPLPGQSR ALSPHDWASM IRNIKDAARY VTEEHGLSFV FHPHVGSGVE TEAEVIRLLE ETSEDSVGLC FDFGHHAYTG ADAVAFMKRY ADRIPYYHFK NVDPVLLAHI RQNNINFIEG FQSGVMCELD KGMVDFAEVR DFLATRGFDG YAVYEQDMYP CPPEKPFPIA CHNRQVLREL GI
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