| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7452 |
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| Symbol | |
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| ID | 7380475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 418593 |
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| End bp | 419408 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641503 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002539800 |
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| Protein GI | 222102761 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCTGT CCAGTCGCCG CCATGATGTG TTTGGCCTGA TCATTCTGCT GTTTCTGATT
GTCTTTATCG TTCTGCCCGT GCTCACGGTT TTTCTCTGGG CCTTTGCCGA GCAATGGTTC
TACCCCTCCG TTCTGCCCAC CAAATGGGGT TTTCGTTTCT GGTCTGCGGT CTTGGCCCGC
CCGGATGTCT GGGCGGCCCT TTGGACGTCG GTTGAGCTGT CGCTGACCGT GACAGCACTG
TCCGCCATCA TCTGCCTGCC AGCGGCCTAT GCCTTTGCCC GCATGGATTT TCCGGGAAAA
TCGGTGTTCA TGCTGTCATT TCTGATGGCC AATGCTTTTC CGCGCTTTGC ATTGATCATC
TCCATCGCCG TGCTGTTTTT ATCCTTCAAT CTGGTGGGCA CCTTTACCGG TGTGGTGATC
ATTCAGCTGT TGAATACCTT GCTGTTGATG ATCTGGCTGC CAGCCGCCGC GTTCAGAGCC
GTCAGCCGGG ATATGGAAGA GGCGGCTCGC GATGTCGGCG CAAACCGCTG GCAGGTGTTT
CGCCACATCA CATTGCCCCA AGCTTTTCCC ACGATTGCCG CTGCCTTGCT AATGACCTTC
GTTTGGACCT TCTACGAGAC GGAAGGCGCG TGGCTGGTGG GTGCACCGCG CATTCGCACC
ATGCCGCTGT TGATGATGTC GATGATCAAC AATCAGTTGG TGGTGCAATA CGGGGCTGTG
CTGTCGGTCA TGCTCTGGGT GCCGTCTCTG GCCGCCATCC TGATGGCGCG CCGGGTGATT
GGCGGCGAAG CTTTTGCCAA AGGGCTCGGC GGATGA
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| Protein sequence | MFLSSRRHDV FGLIILLFLI VFIVLPVLTV FLWAFAEQWF YPSVLPTKWG FRFWSAVLAR
PDVWAALWTS VELSLTVTAL SAIICLPAAY AFARMDFPGK SVFMLSFLMA NAFPRFALII
SIAVLFLSFN LVGTFTGVVI IQLLNTLLLM IWLPAAAFRA VSRDMEEAAR DVGANRWQVF
RHITLPQAFP TIAAALLMTF VWTFYETEGA WLVGAPRIRT MPLLMMSMIN NQLVVQYGAV
LSVMLWVPSL AAILMARRVI GGEAFAKGLG G
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