| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7441 |
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| Symbol | |
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| ID | 7380469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 409990 |
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| End bp | 410940 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641497 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002539794 |
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| Protein GI | 222102755 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.105737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAG ACAGTGAGCA TCTCGAAATC CTGGCGGTCA TCGTTGAAAA GGGCGGACTG
ACGGAGGGCG CTGAAGCGCT TGGGAAATCG CAGCCATCAG TGTCGCGCAC CATGGCGCTT
TTGGAGGAGC GGATCGGCAC GCCGCTGTTT GAGGCCGGGC GTCGGCCTCT GCGCCCGACG
GAGCTTGGCA ATCAGCTGGC GCGGCTCGGG GCCAAAATCA GAACTCAAAA CCTTGAGGCC
AGCCGTCTGG TGCAGCGCTA TCGTCAGGGG CAGGCGGGCC GATTGCGTCT GGGCGGAACG
CCAATTTTCT TCGATGGCGT GGTTGCCGGA ATGGTGGCGG AATTTCAAAA CCGCCATTCC
GATGTGCAAA TCACCCAGAC CTATGGCTAT TTCGAGGATC TTTCTGCCGG CCTGCGCAGC
GGTGCGCTTG ATCTCGCTAT CCTTCCGATG CACGCCAATA TGATCCCGGC TGACATGCAG
TTCACACCCT TATTGGCTGG CCGCAACGTT ATTGTTGGCA GTGCCACACA CCCCTTGGCG
CGGCGCGGTG CGATCACGCT GGCGGACATC GAACCCTATT CCTGGATTGC GCCGCCGCCC
GACAGCCCGC TGTTTCGCGA TTTGCAACGA TCTTTGAAAT CAATCGGGCT CGATGATTTC
AAAGTGAGTT TTTCAGGAGG AACGCTGGCG TCTATTTTCA GCGTCGTGCT GGGGTCCGAT
TCTCTGACGG TGCTGCCCTA TTCGGTTGTC TTTACCCACC AACGGGTTAT CCCTCTCCAG
GCGCTGCCGC TGCGCATTGA GCATCCTGAT CGCCAACTGG GATTGCTGAC AGCCACGGAG
CGGATGCCGC CGCCAGCGCT GGAGCGGTTT GTCGCGTTTG TGACCGAGAA GTTCAAACAT
CTCAGCACCC GCATGGAGCA TGAGCAGCAA GTAACCCGCC GCCGCGGCTA A
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| Protein sequence | MKIDSEHLEI LAVIVEKGGL TEGAEALGKS QPSVSRTMAL LEERIGTPLF EAGRRPLRPT
ELGNQLARLG AKIRTQNLEA SRLVQRYRQG QAGRLRLGGT PIFFDGVVAG MVAEFQNRHS
DVQITQTYGY FEDLSAGLRS GALDLAILPM HANMIPADMQ FTPLLAGRNV IVGSATHPLA
RRGAITLADI EPYSWIAPPP DSPLFRDLQR SLKSIGLDDF KVSFSGGTLA SIFSVVLGSD
SLTVLPYSVV FTHQRVIPLQ ALPLRIEHPD RQLGLLTATE RMPPPALERF VAFVTEKFKH
LSTRMEHEQQ VTRRRG
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