| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7439 |
|---|
| Symbol | |
|---|
| ID | 7380467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | - |
|---|
| Start bp | 407029 |
|---|
| End bp | 408786 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643641495 |
|---|
| Product | 2,4-dichlorophenol hydroxylase |
|---|
| Protein accession | YP_002539792 |
|---|
| Protein GI | 222102753 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA TTACAACGGA TGTGCTGATT ATCGGCACTG GACCGGCAGG CTCGGCAGCG
GCAGCCCTGC TGTCGACCTA CGGGATCAAC AATATGGTCG TCAACCGCTA TCGCTGGTTG
GCCAATTCAC CACGCGCTCA CATTACCAAC CAGCGTGCCA TGGAAGTGCT GCGCGATCTT
GGCCGTGATG TGGAGGACGA GGCCTACTTG TTTGCGACGC ATCAGGAACT GATGGGCGAA
AACATTTTCT GCGAAAGTCT GGCGGGTGAA GAAATTGGCC GCCTGAAAGC TTGGGGCAAT
CATCCCCTGA GCAAAGCTGA ACATCTGATG TCATCTCCGA CGAAGATGAA TGACTTGCCG
CAAACTTTCA TGGAGCCTTT GCTGTTCAAG GCAGCCTGCT CTCGCGGCAC TCAAGCGCGC
ATGTCCACCG AATATCTGCG CCACGAACAA AATGCCGAAG GCGTGTTGAC CACCTGCAAG
GATCGGCTTT CGGGACATGA ACTGACCATC CAGTCGAAAT ATCTGATCGG TGCCGATGGC
GCAAAGTCGC TGGTGGCCGA GCATGCTGAC CTGCCGTTTG AAGGCAAAAT GGGTGTCGGC
GGCTCGATGA ACATCCTGTT CAAGGCCGAC CTCACCAAAT ATGTCGCGCA TCGTCCTTCG
GTTCTCTACT GGGTCATGCA GCCGGGTGCC GATGTCGGCG GCATTGGCAT GGGGCTGGTG
CGCATGGTGC GCCCTTGGAA TGAATGGCTC ATCGTCTGGG GCTATGACAT CAACGGGCCC
GAACCGGAAG TGACAGAGGA GCTTGCCACC GGCGTGGCGC GGCAGCTGAT CGGCGATCCT
GATTTGGAAA TTGAACTGTT GGCGGCCAAC ACCTGGACCG TGAACAATTA TTATGCCACC
CGCACCTCCA ATGGCCGCGT GTTCTGCGTT GGCGATGCCA TCCACAGGCA TCCGCCCTCC
AATGGCCTCG GCTCAAACAC CTCGATTCAG GATTCCTTCA ACCTTGCCTG GAAGCTTGCC
ATGGTTCTGA AGGGTCAGGC TGGCGAGGGC CTGCTGGAAA GCTTCAACGT CGAACGCGCC
CCAATCGCCA AGCAGATCGT CAGCCGCGCC AACCAGTCGA TTGGCGAAAC CGGGCCGATT
TTCGCAGCAC TTGGCATGAG CGAAGGCGTC GATCCAGAGC AGATGCAGAA AAATCTTGAA
GCCCGCACGG ATGGAACCGA GGCTGCCGAA CAGCAACGCG AGGCCATCCG CAAGGCAATC
GCCTTCAAGA AATATGAGTT TGACGCGCAT GGCATCGAAA TGAACCAGCG TTATCGGTCC
GATGCCATCG TCACCGACGG GCAGATCGAA CCCGACTTCC TGCTGGATGC CGACCTGCAT
CACCAGCCAA CCACTTGGCC GGGTGCACGC CTACCGCATG CCTGGCTCTA CAAACATGTC
GGAGGTGCCG AAGTATCAAC TCTCGATCTC TGCGGCCATG GCAAATTCAC GCTGCTGACG
GGCCTGGGTG GAAAAGCCTG GATTGACGCC GCCGCAGCGG TGGGCAGCGA ACTGGGCATG
GAGATCAACG CGCATATGAT CGGCCCGCGC CAAACCTATG TCGATCCCAC CGGCGACTGG
GCGCGGTTGA GCGAGATCCG CGACACCGGC TGCGTTCTTG TTCGGCCAGA CCACCATGTG
TGCTGGCGCA GCACGGCAGC AAGCGGCACA CCGGCGGACG ACTTGCGCCG TGTGCTGCGG
CAGATTTTGG CGCTCTAA
|
|---|
| Protein sequence | MADITTDVLI IGTGPAGSAA AALLSTYGIN NMVVNRYRWL ANSPRAHITN QRAMEVLRDL
GRDVEDEAYL FATHQELMGE NIFCESLAGE EIGRLKAWGN HPLSKAEHLM SSPTKMNDLP
QTFMEPLLFK AACSRGTQAR MSTEYLRHEQ NAEGVLTTCK DRLSGHELTI QSKYLIGADG
AKSLVAEHAD LPFEGKMGVG GSMNILFKAD LTKYVAHRPS VLYWVMQPGA DVGGIGMGLV
RMVRPWNEWL IVWGYDINGP EPEVTEELAT GVARQLIGDP DLEIELLAAN TWTVNNYYAT
RTSNGRVFCV GDAIHRHPPS NGLGSNTSIQ DSFNLAWKLA MVLKGQAGEG LLESFNVERA
PIAKQIVSRA NQSIGETGPI FAALGMSEGV DPEQMQKNLE ARTDGTEAAE QQREAIRKAI
AFKKYEFDAH GIEMNQRYRS DAIVTDGQIE PDFLLDADLH HQPTTWPGAR LPHAWLYKHV
GGAEVSTLDL CGHGKFTLLT GLGGKAWIDA AAAVGSELGM EINAHMIGPR QTYVDPTGDW
ARLSEIRDTG CVLVRPDHHV CWRSTAASGT PADDLRRVLR QILAL
|
|---|
| |