| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7426 |
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| Symbol | |
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| ID | 7380456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 396552 |
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| End bp | 398033 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641484 |
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| Product | 2-methylcitrate dehydratase family protein |
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| Protein accession | YP_002539781 |
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| Protein GI | 222102742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.354757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGT TGATTGACGA CGTTTCCAAA CGGATCGCTT CAGGAGCACC CTTTCGGCAA
GATCCCCTTG TTTCGCAGGG CCTGTCTATC CACGTCCTCG ACACTATCGG TGCATGGATT
GCGGGGCGTG CGACACGAGA AGGCCATCGT CTTTCACGGC TCAGAGATGA GAAATCCCAA
TCATTGGCAC CACTGACGCG CTCAACATTG GACACGATTG CACTGAGGGT CGCCACCGCA
CGGCTGAGCG AGGTGGACGA TGTGCATATG CCCTCATGCA CAACGCCGGG CGCGATTGTG
GTTATGACGG CTTTGTCTTT GATGGCCGAT CTGGCGGATC GTGCCGACAC CATTCTGTTT
ATCGATGCAC TCCACGCGGG ATATGAGATC ATGACCCGCC TTGGCGACGC GGTGTCCGGT
CCTGATATCT TACACAAGGG CATCTGGCCC ACCTATCTGC TCGCACCGGT CACAACAGCC
GCAGTCACCG CAAAGCTTTT GGGCTTGGAT TGGGAAAGAA CATCGCATGC ACTGGCCATT
GCGCTTTCCA CGTCGAGTGG AAGGCCGGGA GGCAGCGTGA GTGGCGGGGT GGTTGGCGGC
GCGGGAACCT CTGCGCGTTG GTTGCTCGCG GGCCTTGCCG CAAGAACGGG CTGCATCGCC
GCCCTCAGTG CCTCGAAAGG CTTCAATGGC GATAGAAGCT TCATGGATGG AGAGTGGCCC
GCCCGAAGCC ACGGCGTAAC ATTGGAGAAA GATATTCTCC TGAATGTCTT TGAAGGTCAG
GCGGCCGTCC TGGGCACCAG TATCAAACCT TATTGCGCAG CCAAGCACGC CATAGCCGCC
ATCGACGGCT TTCAAATGCT TCTGAAACAG GGGGTTCCGC TTGACACTGT GAGCAAGGTC
GTTGTGAAAG CCCCACCCGT GCATGCTGGC ATGATCGGCC ACCATGATGT CAGTTTGAGC
CGCCTTTCTC GCATTACCAG TTGCAGCTAC AATCTCGCTC TGGCGGCATT TTGGCCGGAT
AAATTGCTCG ACATCGAGCG AACCGATGCC GTGGCTGACC CAGCGGTGGT GGAGTTTGCA
AAAAAGGTGG AGGTTGTTGC CGATCCTGAA CTGGCGCACC AATGCCCTCA GAATTACCCC
GCGAGCATCG ATCTTTTCAT CAATGAGAGG ATTATTGCTT CAATTGCCAT ATCGGACGCC
CTCGGCGACC CCGCCAAACC CTTCGATCTT GATTTGGCAC GAGGAAAATT TCGCCGTCTC
GCGCGCGGTA TCATCCGTGA AAGCCTGGCG ATGCACATTG AGCAATGCTG TCTGGACTTG
AACAATCCAA CGGCTGGGCC GGAACTGGCG GCGATCATGA CGGAGATAGA CAATTCACTG
ACACCCAAAA CGGTGGCAGA CCATGACAGG GAAGACATGC AAAACGCCGG AATCATATCG
GCCGCAGAAC TGGAGAGGAG AGATTATGGT AGGGTCAGTT GA
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| Protein sequence | MTTLIDDVSK RIASGAPFRQ DPLVSQGLSI HVLDTIGAWI AGRATREGHR LSRLRDEKSQ
SLAPLTRSTL DTIALRVATA RLSEVDDVHM PSCTTPGAIV VMTALSLMAD LADRADTILF
IDALHAGYEI MTRLGDAVSG PDILHKGIWP TYLLAPVTTA AVTAKLLGLD WERTSHALAI
ALSTSSGRPG GSVSGGVVGG AGTSARWLLA GLAARTGCIA ALSASKGFNG DRSFMDGEWP
ARSHGVTLEK DILLNVFEGQ AAVLGTSIKP YCAAKHAIAA IDGFQMLLKQ GVPLDTVSKV
VVKAPPVHAG MIGHHDVSLS RLSRITSCSY NLALAAFWPD KLLDIERTDA VADPAVVEFA
KKVEVVADPE LAHQCPQNYP ASIDLFINER IIASIAISDA LGDPAKPFDL DLARGKFRRL
ARGIIRESLA MHIEQCCLDL NNPTAGPELA AIMTEIDNSL TPKTVADHDR EDMQNAGIIS
AAELERRDYG RVS
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