| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7393 |
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| Symbol | |
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| ID | 7380430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 367608 |
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| End bp | 368393 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641458 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002539755 |
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| Protein GI | 222102716 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.952149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TCGCAATTGT ACTGTCCGTC ATCGCCGCAA CATTCGGCAT GACCAAGCCG
TCCTCCGCTG CTGACGATGT CATTCGTTTC GGCGTGGCCG CTGAGCCTTA CGCACCGTTC
TCAGTAAAAG ATGCCAGCGG CAAATGGCAG GGTTGGGAAA TCGACCTCAT GGACGCCGTT
TGCAATCAGA TGAAGGCCAA GTGCGAGATC GTTGATGTCG CATGGGACGG CATCATCCCG
GCTCTGCTTG CCAAGAAGTT CGACGTTATC TGGAGTTCCA TGTCGATTAC CGACGAGCGC
AAGAAGGTCA TCGACTTCAC GGACAAGTAC TACTACTCTC CCAACGTGCT CGTTGGCGCA
AAGGCTGATA CACGCAGCTT CGATGTCGCC AAGCCCGAGA CCTTCAAGGG CATTACCGTT
GCAGCGCAAA GCTCCAGCCT GCAGGCCACC TACATGCAGC AGAAATTCAA CGGTATGTCT
GACCTCAAGC TCTATCCGAC CCTTGATGAT GAGATTGCCG ACATACAGGC AGGCCGCGTC
GACCTCATGG CCGCAGCTGG CATCCAGATC CAGGACTTCC TGAGCAAGCC TGAGGGGCAG
GCTTACGAAA TCAAAGTGAC ATTGCCTCAC GAAACGATGT TCGGTTATGG CGACGGCGGC
GGCCTACGCA AGGAAGATAC CGCACTGAAG GACAAGTTGA ATGCCGCTCT CAAGGCGGTG
CGCGCCAGCG GTGAATACGA TGCGATCACC AAGCGCTATT TCAACTTCGA CATCTATGGC
GAATGA
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| Protein sequence | MKKIAIVLSV IAATFGMTKP SSAADDVIRF GVAAEPYAPF SVKDASGKWQ GWEIDLMDAV
CNQMKAKCEI VDVAWDGIIP ALLAKKFDVI WSSMSITDER KKVIDFTDKY YYSPNVLVGA
KADTRSFDVA KPETFKGITV AAQSSSLQAT YMQQKFNGMS DLKLYPTLDD EIADIQAGRV
DLMAAAGIQI QDFLSKPEGQ AYEIKVTLPH ETMFGYGDGG GLRKEDTALK DKLNAALKAV
RASGEYDAIT KRYFNFDIYG E
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