| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7379 |
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| Symbol | |
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| ID | 7380419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 354596 |
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| End bp | 355639 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641447 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002539744 |
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| Protein GI | 222102705 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.144359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCAGA AAAAAACTGC CAAGAAGACG ACGATCTATG ATCTGGCCGA GCTTGCGGGC
ACATCGGCCA GCGCTGTGAG TGCTGTTTTG AACGGCAATT GGAAGAAGCG CCGGATCAGC
ACGCAATTGG CGGAAAAAAT CAGACGGATT GCTGAAGAGC AAGGCTATGC GCTCAACATG
CAGGCCAGCC TGCTGCGCCG GGAAAAATCC CAGATCATCG GCATGATCGT CCCTAAGTAT
GACAACCGTT ATTTTGGCTC GATCGTAGAG ACCTTCGAGG ACATGGCGCG CTCGCGCGGC
CTTTTCCCGA TTATCACCTG CACGCGACGT GACCCGGAGC TTGAAGTAGA GGCCGCACGG
ACTCTGCTGT CCTATCAAGT GGAATGGCTG GTTTCGACCG GAGCAACCAA CCCCGACCGG
ATCACCGAAA TATGCACCTC CGCCGGCGCG CGCAGCATTA ATCTCGACCT GCCGGGAACA
GCAGCACCTT CCGTTATTTC GGATAATTTT GCAGGGGCGC GGGAATTGAC CCGTCGTATT
CTAAAAAATT GCCACAGCAA GACCGGCAAG GCCGCACCCC TGCTGTTTGT TGGCGGGCGC
GCCACTGATC ACAACACCTT GGAGCGGGTG CGCGGTTTTC GGGCAGCCCA TCAGGATATG
GGCGTTCCGA TCGATGAACG CCACATACTC ACCTGCGGAT ACGCCCCGGA AAAAGCAGAA
AAAGCTTTGC AAACATTGGC GATGGTTGAA GGCGAAATTC CGGGCGGAAT GTTTGTAAAC
TCCACCATCT CTCTGGAAGG CGTCATGCAG TGGCTCAAGA CCTCCGGCTA TGTCGCGGAT
CGGCTACCAG CGATGGGCTG TTTCGACTGG GATCCCTTTG TGGCGCTTTT GGGTGGCGAC
ATCGAAATGG TGCGCCAGGA TGTCGATGGC ATGCTCAAGG CGGTTTTTGA GATTATCGAT
ACAGGAATAT CACAGACTAC ATTCATTGAG GTGCCGCCGT TATTCTCTGG GCAAGCAAAT
GCTGAGGTGA AAATCACCCC TTAA
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| Protein sequence | MNQKKTAKKT TIYDLAELAG TSASAVSAVL NGNWKKRRIS TQLAEKIRRI AEEQGYALNM
QASLLRREKS QIIGMIVPKY DNRYFGSIVE TFEDMARSRG LFPIITCTRR DPELEVEAAR
TLLSYQVEWL VSTGATNPDR ITEICTSAGA RSINLDLPGT AAPSVISDNF AGARELTRRI
LKNCHSKTGK AAPLLFVGGR ATDHNTLERV RGFRAAHQDM GVPIDERHIL TCGYAPEKAE
KALQTLAMVE GEIPGGMFVN STISLEGVMQ WLKTSGYVAD RLPAMGCFDW DPFVALLGGD
IEMVRQDVDG MLKAVFEIID TGISQTTFIE VPPLFSGQAN AEVKITP
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