| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7370 |
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| Symbol | |
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| ID | 7380411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 345322 |
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| End bp | 346077 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641439 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002539736 |
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| Protein GI | 222102697 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.660604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGAC ATCCGTTCAC CTTTCAGCGG GGCTTCAAAC AACGCGGCGA AGGCTTGCCA
ATCCATGCCC ACGACGAGGC ACAACTCACC TTTGCCGCAT CTGGGATGGT GCAGGTTCAC
ACTGAGGAAG GCCGGTGGCT GGTACCTTCA CAGCTCGCAG TCTGGATTCC CGCTCGCGTT
CCCCATCGCG TCGATGTCTT GACGGACGCC GATTTATGGA TGGTCCATTG GGAGCCATCG
GCGGCGCAGG AATGGGCGCC TCCGGTACCG CTCGATCAGA CATTCGCTTT ACGCGTGACC
CCGCTCATGC AGTCTTTGCT CGAGGCGGCT TTCATGGCCG ATGTCAGCCG AGAGAAGGGA
GAACTCGTAG CCAAGCTCAT GCTTCACGAA CTGACGTCAA CGGCCCACGC GCCAACATTC
CTTCCCCTGC CGACAAGCAC AATCGGGCTT CGGGTCGCAG ACATGGCTCT CACCGATCAT
CAGAGCCTGA TGAGCATAGA TGAATTTGCA TCGCGGGCCG CGACATCCGT GCGAACCTTA
AGCCGATTGT TTCCTTCGGA GACAGGGTTG ACCTTCAAGG CCTGGCGACA ACGGGCTCGG
ATCGTGCAGT CGATGGATCT ACTCGCCAAA GGAAAGCCAA TCGCCCGCGT GGCCGCCGAC
TTCGGGTTTT CCAGTGCCGC TTCGTTCTCG CACGCTTTCC GGCAGGTCAC GGCCATGACG
CCAACCCAGT TTATGGGGGT GAAACCTTTA GCCTAG
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| Protein sequence | MPRHPFTFQR GFKQRGEGLP IHAHDEAQLT FAASGMVQVH TEEGRWLVPS QLAVWIPARV
PHRVDVLTDA DLWMVHWEPS AAQEWAPPVP LDQTFALRVT PLMQSLLEAA FMADVSREKG
ELVAKLMLHE LTSTAHAPTF LPLPTSTIGL RVADMALTDH QSLMSIDEFA SRAATSVRTL
SRLFPSETGL TFKAWRQRAR IVQSMDLLAK GKPIARVAAD FGFSSAASFS HAFRQVTAMT
PTQFMGVKPL A
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