| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7364 |
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| Symbol | |
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| ID | 7380406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 339924 |
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| End bp | 340874 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641434 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_002539731 |
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| Protein GI | 222102692 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.180283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGGT CGCAGCTGGA AGCAAAGTTC GGCCCCTTTC CGAAGCTTCC CGACGGCACC
AAGGCGGGCG CCGTCTCAAA GACACTGACC AACGAATACT GGCGGTCGCT CGGTGAGGGC
TATGCCGCGT TCGGCAAGGC CAAGAACGTT CCGGTCGCCT ATCAGGCGGC GCAAAGCGAA
GGCGACCAGC TTGGTCAGTT GACGATTGCC GAGGGGATGA TCACCCAAGG CTATAACGTT
CTGCTGGTGT CGCCACAGAC GGATTCCAAT CTCCAACCGG TGATCGAACA GGCCAAGGCC
GCCAATATTC CGGTCGTTGA CGTCAATGAT GCCGTGATCC CGCAGGCCGA GCACTATGTC
GGCAATGTTC AGCGCGACAA CGGCGTGCGC GTCGCCAAAT GGTTCATCAC CAACCGTCCG
CAGGGTGGCA AGGTGGCGAT CATCGAGGGC CAGGCCGGTG TTTATGCCGC CGTGCAACGC
ACCGACGGCT TTAAATCCAC CATCGGTGAA AACGGCAGTT TCAAGATCGT CGCCAGCGTT
CCCGGCAATT GGGACCGCCA GACCTCCTAC GATGCCGCGA CCAACATCCT CAACCAACAC
CCCGATCTTA TCGGCTTCTA TGCCAACAAT GACGGCATGG CATTGGGCGT GGTCGAAGCC
GTCAAGGCGG CAGGGCTTGC GGGCAAGGTC GCTGTCTTCG GCACTGACGG TATTTCAGAC
GCCTACGCCT CGATCAAGGC AGGCGAACTG ACCGGCACCG TCGATAGCTT TCCGGTTCTA
ACAGGTGAAG TCGCCCTTGA AACAGCCCTT CGGCTCGTTG CCGGCCAGAA ATTGCCGCGC
GTTGTCGCAA CGCCTCAGGC GCTGATCACC GCCGACAACC TCGCCCGCTA CCAAGGCAAG
GGCGTCGATG TGCGCGCCGT GCTGATGGAA GATGCCAAGG CTGCAAAATA A
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| Protein sequence | MDWSQLEAKF GPFPKLPDGT KAGAVSKTLT NEYWRSLGEG YAAFGKAKNV PVAYQAAQSE
GDQLGQLTIA EGMITQGYNV LLVSPQTDSN LQPVIEQAKA ANIPVVDVND AVIPQAEHYV
GNVQRDNGVR VAKWFITNRP QGGKVAIIEG QAGVYAAVQR TDGFKSTIGE NGSFKIVASV
PGNWDRQTSY DAATNILNQH PDLIGFYANN DGMALGVVEA VKAAGLAGKV AVFGTDGISD
AYASIKAGEL TGTVDSFPVL TGEVALETAL RLVAGQKLPR VVATPQALIT ADNLARYQGK
GVDVRAVLME DAKAAK
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