Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7351 |
Symbol | |
ID | 7380561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 330153 |
End bp | 331007 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643641424 |
Product | transcriptional regulator GntR family |
Protein accession | YP_002539721 |
Protein GI | 222102682 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.307061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTTT ACAGAGCAGT TGAATTTGCG TACGATTCAT CATACATATT CCACTTAGAG AGACGAAAAC GGCTCTGCCT TCTGCGGCAG GGCATGAAAG TGGTGGATGG TGTGACCGGT CAAGTGAAAA CACGCGCCAA GGGCGCTGGC TCCCTGGTCG CACAGGTCAG CGACAGCCTT CGCAAGGCGA TCCTTGGCGG GGACTATGCG CCGGGCGATC GGCTTCCCAG CGAAATGGAA CTGACCGAGG CCCATGGTGT CAGCCGAACC GTTATCCGCG AGGCAGTCAC CGGCCTGCGT TACGATGGGC TGGTCGAGGT GCGCCAAGGG GCTGGCATTT TCGTCCTCAA TCATCATCAA TCACGCTCAA ACCCGTCGAA GCTGGATCGC GCCCGGCTGT CCTCAGATCT AGAGGTTTTG GAGATCCGCA CGCCGCTGGA GATAGAGGCT GCCGGGCTTG CCGCGCTGCG CCGTTCGCCT GCGCAGGAGG AAGCGATTTT CGACTGCCAT GCAAAATTGC TGGCGTGTAT CGAGGCCGAC CGCTCCATTC GCGAGGCCGA CCTGGCCCTG CATATGGCGA TTGCTGCGGC CACCAATAAT CCGCTGTTTA CGCAATTTCT CGAGATGCAC GGCGCATCCG CTATCCCTCA GTCCAAAGTG GTTGCGGAAA ACCGAGCCGC TGAGCAGACG GCCTATCGCC GCCTCATCCA CAGGGAACAC CAGGCCGTGG TCGTGGCGAT TTCCGACGGC GACGAAAAAG CGGCCCGCGC CGCTATGCAG GATCATCTGC GCGGCAGCCA GTTGCGCTAC CGTGATCTGT TGCGCGATCT GCGCGGTATC GGCAGCGAGA CCTGA
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Protein sequence | MAFYRAVEFA YDSSYIFHLE RRKRLCLLRQ GMKVVDGVTG QVKTRAKGAG SLVAQVSDSL RKAILGGDYA PGDRLPSEME LTEAHGVSRT VIREAVTGLR YDGLVEVRQG AGIFVLNHHQ SRSNPSKLDR ARLSSDLEVL EIRTPLEIEA AGLAALRRSP AQEEAIFDCH AKLLACIEAD RSIREADLAL HMAIAAATNN PLFTQFLEMH GASAIPQSKV VAENRAAEQT AYRRLIHREH QAVVVAISDG DEKAARAAMQ DHLRGSQLRY RDLLRDLRGI GSET
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