| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7299 |
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| Symbol | |
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| ID | 7380521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 263446 |
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| End bp | 267846 |
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| Gene Length | 4401 bp |
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| Protein Length | 1466 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641385 |
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| Product | polyketide synthetase |
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| Protein accession | YP_002539682 |
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| Protein GI | 222102643 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACC TGTCCGCAGC CCCTCTTTCC GATGACAACA GGCATCATAT TGCCGTCATT
GGCATGGCTG GCCGCTTTCC CGGTGCACCG GATGTTGAAC GCTTCTGGCA AAACCTGGTT
GATGGTGCGG AATCGATTGA GCGCCTCTCG CCGGAAGCGC TCAAGCAACG CGGCGTCTCT
GCGGAAATGG CGGCATTACC CGATTTTGTC GCCGCCAGCA CACCGCTGGC GGGTGCGGAT
CGCTTCGATG CGGGTTTTTT CGGCTACAGC CCGGCCGAGG CTGAAATTCT CGATCCGCAG
CAGCGTATCT TCCTTGAATG CGCCTGGCAG GCGCTGGAAG CCGCCGGTTA TGTGGGTGAT
CGCACCCAAG GACCGATTGG CGTTTTCGCC GCCGCTGGCA TCAATACCTA TGTCTTCAAC
CTGCATGACA ATAGCCGCAT CCGCGAGACC GTCAGCCCCT ATGAGCTGTT CGTTGGCAAT
GACAAGGACT TTCTAGCCAC CCGTACAGCG TTCAAGCTGA ACCTGCGAGG CCCGGCCATT
ACCGTGCAAA CCGCCTGCTC CTCCTCGCTC GTTGCCGTCC ACATGGCCGC CCAGAGCCTG
CTGTCCGGCG ATTGCGACAT GGCGCTGGCT GGCGGCATTG CACTCTCGCA GTCCTCCGGC
TACCGCGCTC GCGAAGGCGG AATCCTCTCG CCTGATGGCC ATTGCCGCGC TTTTGATGCG
GCCTCAAGCG GCACGGTCCC CGGCAGCGGG GTCGGTATCG TCGTTTTGAA ACGGCTGGAA
GATGCGCTGG CCGATGGCGA CACGATAGAC GCCGTCATCC TTGGCTCTGC GATCAACAAT
GACGGTGCGT TGAAGGCGAG CTTCACCGCG CCGCAGGTCG ATAGTCAGGC GGCGGTGATC
GCCGATGCGC AGGCCATGGC AGGCGTGCGC GCTGATACCA TTGGCTATAT CGAGGCCCAT
GGAACGGGCA CCAGACTCGG CGACCCGATA GAGGTTGCAG CACTGACCAA GGCGTTTCGC
CGCGATACCG AGCGCCGGGG CTTCTGCGCG CTCGGCTCCG TCAAAACCAA TATTGGCCAT
CTCGACACCG CCGCCGGTAT TGCAGGTTTC ATCAAGGCCG TGCTGGCCCT GAAAAACCGG
CGGATTCCGG CAAGCCTCCA CTATGAGAAC CCGAATCCGC AGATTGATTT CGCAGCCAGC
CCCTTCTTCG TCAATCAACG TTTGCGCGAT TGGGACAATC AGATTGGCAC GCGCCGCGCA
GGCGTAAGCT CCTTCGGCAT TGGCGGGACC AATGCCCATG TCGTGCTGGA AGAGGCCCCA
CCCAGCCCGG CATCAAAGGC AGGCGGCGGC CCGGAACTGT TGCTTGTGTC GGCACGAACC
GAGGAGCAGC TTGCAGCCAG CAGCGAGGCC CTCGCAGCAG GCTTGGACCG TGCAGATGCC
CCGGCGCTTG CGGATGTGGC GCACACGTTG CGCCATGGCC GTCGCGATTT TGCCAAGCGC
CGCTTCGTCG TGGCACGCGA TGCCAAAGAG GCTGCCAGCA ATCTGCGCAA CCTCTCTCAA
ACCGCCACGG CGGAAGGCGA GACAGCGCAA GCCGTTTTCC TGTTTCCCGG TCAGGGCAGT
CCATATACGG CGATGGGCAA GGCGCTTTAC GCCGACCTGC CAGCCTTTCG CGCCCCGTTT
GATGCCTGCG CATCCAAACT GGATGGGCTG ATGGGGATCA ACTTCAAAGC CTGCCTGTTT
TCGAACGCGG ATGACCTTGA CCGCACGGCA TTTGCCCAAC CCGCGCTCTT TGCCGTTGAA
TATGCGCTTG CGCAAGCCTT GATGAGCCAC GGCGTCAAAC CGACGGCCCT GCATGGCCAC
AGCATTGGCG AATATGTCGC CGCCTGCCTT GCGGGTATCT TCGACCTCGA AACAGCGCTC
CAGCTCGTCG TTGCGCGCGG GCGGTTGATG CAGGCTCAAG CACCCGGTGC CATGCTGGCG
GTGATGCATG CGGATGAGCC AATCACGCCG TGGCTTGATG AGGTCATTAC GCTGGCTGCG
GCCAATGCGC ACGGTGTCAG CGTTGTCTCC GGCCCGGTGG AGGCAATTGC AAGCCTACAA
GTGCGCCTGA AAAACAAGGG CATTGCAGGG CGTATGCTGA AAACCGCCCA CGCCTTCCAC
TCGCCAATGA TGACGGAAGC GGCAGTACAG TTTCGCAATG TCGTTGCAGG TGTGCGCCTC
TCAGTGCCGC AAATTCCTCT GATTTCCAAT GTCACGGGAA CATGGATGAC GGCACAGGAT
GCGACCGACC CGGACTATTG GGCGCGTCAC CTGTTGCAGC CCGTCCGCTT CGAAGATGGG
ACACGCACAC TGCAAGCCCT TGCAGCACCT GTTTTCATCG AAATCGGCCC CGGTCGCGCA
CTCGGCACCT TGACCGCTGT GGCGGGCGTT GATGGAAGCC GAATTCTGGC AACACTCGCA
GAAGGCAAGG ATGAATCAGG GCAGGTGTTG TCTGCTGTCG GTCAGTTCTG GCAATTGAAC
GGCGTTCTGG ATTCAGTTGA AGCCTCTGGC CGACGCCGCG TACGGCTTCC CACCTATCCC
TTCCAAAGCG AACGTTACTG GGTCGATGCG GATAGCGAGC CTGCCACGCC CAAAAGAACA
GCAGCACCTG CTGAAGGCCC CGGCCTCTAC CGCACCAATT GGCGGCGTGC GCAATTGAGC
CACGGGCCTA ATCGGTTGAA GGGCCGCGTG CTTGTTTTTG ACGATGGTCA GCTTGGCTCC
ACTCTCGCCA CTGAGCTTGA GCGAAGTGGT GCGGAACCCT ATCGCGCATT GATCGGCGCT
GGTTTCAGTG AACCCGACTT CCGCTGCTTC AGCCTCCGCC CCACGATCAG CGAAGACTAC
GCCAGCCTTT TCGAGACCCT TGCCGAGCGG GGGGCAAGCC CAGACCATAT CGTCTTCGGC
TGGCCTCTCA CCCCTTGCTC GAACGAAGCG CCGGAAGCTG CGGCGCAAGC CCTTCTGGCG
CTGGTGCGGG AACTGGCCAA GAACGACCGC GCGGTCACCC TCACGCTTCT GACAAGATCG
GCAGCCGATG TGACGGGTCT GGAAGATCTC GATATTGCGC AGGCTCTGGT GGCTGGCACT
CTCCAGGTGA TCGCCCAGGA ATATCCGTCG CTCCATTGCC GTCATATCGA CATCGATGCT
GCACGGCCAA TTGAGAGTGC AAGGCGTATT CGCGACGCTC TGTCGGGGAA AGACGATGTG
CTCGCCTTGC GTGGCGCGCA TCGCTGGCTG CCGGAGACGG AACGGTTTGA CGCGCCGCAA
GGCGGCCCGG ACTTCAAGCG CAACGGCGTC TATGTGGTCG TCGGCGATAT CGTTGATGGC
GTTGGCAAGA CCTGGGTTGA TGCTCTGTCT GGGCTCGGCG CAACCGTCGC CTTGCTTCAA
GATACTACGG CACCGGCTTT TGAGTATCCG GCACGTCTCA AACGGCAGCT CGATTGCGGC
GATGCCGCCG CCTTGAAAGG CGCTCTGGAC GATGTGTTCG CAGAGCTGGG CCGGATCGAC
GGCATCTTTC TGAGCCTGCC GCAGTCGAAC CATCAATCCG CCGCGCTGAT TGGTGAGCTG
ACGGATGCCC ATTGGGCCTA TAACATCTCG AGCAAACTGC GCCCGGTTCG TGCGCTTGGT
GAAGCTGTCG CGAAGCGGAA AATTGGCTTT TGCTGCGTTC AGTCCTCGCT CTCAACCCTC
GTTGGCGGGC TCGGCCTTGG TGCTTACGCC GCCACGCACC ATGCCATCGA CCGGATTGTC
GCCGAAGAGA ACAAGAACGG CACCACGCCA TGGTTTGCGA TTGGCTATCC ACTGATCGAG
GCGGAACCCG GCACGACCTT GCAGGCGACG GGCCGTGCAA ACGCCTTCGC GATATCGACT
GAGGCCGCAT GGGATCTGAC GCGATGCCTG ATTGAAAACG GCGCAACCGG ACAGACCATG
CTGTCGGGTG GGACCATTCC CCCGGTCACG TCCGACATCG ATGCGCAAGA GGCAGCCGCC
ACTGACGGCG GGCGTGGACG CCCCGCACTC GGTGTCGCCT ATCGCAAACC GGGCAATGAC
ACCGAGGCGA GGATCATCGG CATTTTCGAA GAGATCCTCG GCCTGTCACC CATCGGGGCC
GATGACGGCT TTTATGAACT CGGCGGCCAT TCCCTGCTCG CCATCCGCGC CGTTGCCAAA
CTCCGCGAAG CCTTCCCCGT CGATATCGCC ATGCGCGAGC TGCTTTTCGA CAATCCGACC
GCCGCAGCCA TCGCCAAATC GATTTTGGAG CGCATGACGG AGAAGACCGA CCTTTCTGCT
CTCGCCGATC TTCTCGATGA GGTCGATACC CTATCCGACG CCGATGTGAG CAGGCTTCTC
GCCGGAGGAA ATGCACGATG A
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| Protein sequence | MNDLSAAPLS DDNRHHIAVI GMAGRFPGAP DVERFWQNLV DGAESIERLS PEALKQRGVS
AEMAALPDFV AASTPLAGAD RFDAGFFGYS PAEAEILDPQ QRIFLECAWQ ALEAAGYVGD
RTQGPIGVFA AAGINTYVFN LHDNSRIRET VSPYELFVGN DKDFLATRTA FKLNLRGPAI
TVQTACSSSL VAVHMAAQSL LSGDCDMALA GGIALSQSSG YRAREGGILS PDGHCRAFDA
ASSGTVPGSG VGIVVLKRLE DALADGDTID AVILGSAINN DGALKASFTA PQVDSQAAVI
ADAQAMAGVR ADTIGYIEAH GTGTRLGDPI EVAALTKAFR RDTERRGFCA LGSVKTNIGH
LDTAAGIAGF IKAVLALKNR RIPASLHYEN PNPQIDFAAS PFFVNQRLRD WDNQIGTRRA
GVSSFGIGGT NAHVVLEEAP PSPASKAGGG PELLLVSART EEQLAASSEA LAAGLDRADA
PALADVAHTL RHGRRDFAKR RFVVARDAKE AASNLRNLSQ TATAEGETAQ AVFLFPGQGS
PYTAMGKALY ADLPAFRAPF DACASKLDGL MGINFKACLF SNADDLDRTA FAQPALFAVE
YALAQALMSH GVKPTALHGH SIGEYVAACL AGIFDLETAL QLVVARGRLM QAQAPGAMLA
VMHADEPITP WLDEVITLAA ANAHGVSVVS GPVEAIASLQ VRLKNKGIAG RMLKTAHAFH
SPMMTEAAVQ FRNVVAGVRL SVPQIPLISN VTGTWMTAQD ATDPDYWARH LLQPVRFEDG
TRTLQALAAP VFIEIGPGRA LGTLTAVAGV DGSRILATLA EGKDESGQVL SAVGQFWQLN
GVLDSVEASG RRRVRLPTYP FQSERYWVDA DSEPATPKRT AAPAEGPGLY RTNWRRAQLS
HGPNRLKGRV LVFDDGQLGS TLATELERSG AEPYRALIGA GFSEPDFRCF SLRPTISEDY
ASLFETLAER GASPDHIVFG WPLTPCSNEA PEAAAQALLA LVRELAKNDR AVTLTLLTRS
AADVTGLEDL DIAQALVAGT LQVIAQEYPS LHCRHIDIDA ARPIESARRI RDALSGKDDV
LALRGAHRWL PETERFDAPQ GGPDFKRNGV YVVVGDIVDG VGKTWVDALS GLGATVALLQ
DTTAPAFEYP ARLKRQLDCG DAAALKGALD DVFAELGRID GIFLSLPQSN HQSAALIGEL
TDAHWAYNIS SKLRPVRALG EAVAKRKIGF CCVQSSLSTL VGGLGLGAYA ATHHAIDRIV
AEENKNGTTP WFAIGYPLIE AEPGTTLQAT GRANAFAIST EAAWDLTRCL IENGATGQTM
LSGGTIPPVT SDIDAQEAAA TDGGRGRPAL GVAYRKPGND TEARIIGIFE EILGLSPIGA
DDGFYELGGH SLLAIRAVAK LREAFPVDIA MRELLFDNPT AAAIAKSILE RMTEKTDLSA
LADLLDEVDT LSDADVSRLL AGGNAR
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