Gene Avi_7278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7278 
Symbol 
ID7380504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp235794 
End bp236444 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content58% 
IMG OID643641368 
ProductTranscriptional regulator 
Protein accessionYP_002539665 
Protein GI222102626 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCG GAACCGCGCT CAGGCGTGCC GAAATCGGGC AAGAGCGTCG TGAAAAGACG 
AGACAGAAGC TCATCGCTGC GGCGGCGCGC GTCATCGCCG CCAATGGTGA CAAGACCGCG 
ACGATCGACG ATTTCATCAG GGCGGCGGGC GTTGCCCGGG GAACGTTCTA CAACTACTTT 
CCCACCCGCG AGAATTTGCT GGATGCATTG TGGACGCAAG TTGGCAAGGA TCCATTTCTT 
GAAATCGGCA AGGCTTGCGC CTCAATCAGC GATCCGGTCG AGCGGTTGAT TGCACAGGCT 
TGGCGCATAT TGATCCGGTC AGGCGAAGAC CAGGCTTGGG GCTGGCTGAT CTTCGCGTTG 
TCCGGCAATG CCGAAACAGT CAACTCTGAC CTGCGGGCCT ATCCTGCACC TGATCTTAAA 
GCCGGTTTGA GCGCGGGACG GCTGCATTAC GACCATCTGG ACAGTGCTCG AGACTTCGTT 
GTCGGCGCGG TCCGGGCTGG TATGAAAACC CAATTGAGCG GGCGTGGCTC GAGCGAATAT 
GCGCACGACA TATGCAAAAT GATCCTGCTT GCTCTCGCAG TCCCTACGGA GGAAGCCAAT 
AGGATTATGG GATCTGCCAC AAGAACAGGC GTTGGAGTAG CGGCGGCTTA A
 
Protein sequence
MAGGTALRRA EIGQERREKT RQKLIAAAAR VIAANGDKTA TIDDFIRAAG VARGTFYNYF 
PTRENLLDAL WTQVGKDPFL EIGKACASIS DPVERLIAQA WRILIRSGED QAWGWLIFAL 
SGNAETVNSD LRAYPAPDLK AGLSAGRLHY DHLDSARDFV VGAVRAGMKT QLSGRGSSEY 
AHDICKMILL ALAVPTEEAN RIMGSATRTG VGVAAA