| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7273 |
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| Symbol | |
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| ID | 7380499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 229181 |
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| End bp | 230149 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641363 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_002539660 |
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| Protein GI | 222102621 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCCA GAGGCTTCCT CTATTACCGG CCAGACGGGC GGCGGATTAC CCAGGCTGAT
GAGATTGCTC GCCTGAACTC TCTGGCAATA CCGCCCGCCT ACACAGACGT CGTCATCTCG
ACGAATCCCT TCTCACACCT GCAGGCAATC GGCACGGATG CCAAGGGTCG TCGGCAATAC
CGCTATCATA AAGACTGGCA CGCCGAGCGA GGCAAGGCCA AGTTCGAACG GCTGGCCGAT
TTCGCGTCCA GACTTCCTGA CCTGCGCGAA CGGGTCGACA TCGACCTTCG TTCGCGTGGC
CTCAATGTCG AAAAGGCGCT GGCAACGGTC GTATGGATGC TCGATAACCT CTATATCAGA
ATAGGGAACG CTGCCTATGC AGAGACGAAC AAGTCGTTCG GCCTTACCAC GTTGCGCAGT
CGTCACGTGA GCGTCGAAGG CGGCAGTCTC AAATTTCGGT TCAAAGGTAA ATCCGGCAAG
GAATGGAATC TTGCCCATAG TGACCGGCGG ATCGCCAATG TCGTGCGAAA ACTACAGGAA
CTTCCAGGAC AACACCTCTT TCAATACGTT TGCGATCAAG GCGGATGCAG ACCCATCTCC
TCACATGATG TGAATGCCTA TATCCGAGAG ATGACAGGTG ACGATTTCAG TTCACGCCAG
TTCAGAACGT GGGGCGCAAC CTGCATGGCA GTGGATGCAC TGGCTTCTGC CGAGGCCGCC
ACGACCAAGC GCGAGTTGGC CCGTCAACTC AATGCAGCGA TTGACGCAGT CGCTGCGAAA
CTGGTCAATA CCCGATCGGT CTGTCGGTCT TCCTACATAC ATCCCGCCGT GTTCGAAGAC
TTCCAAGCGG GTACGCTTCG TGATGTCCTT AAGTTGAAAA CCACGAGTGA ACGACTTCTT
CAATGGATGG ATGAAGGCGA GATCCAAGTG CTAAAATGGC TGAAGAAACA AACAGTATCC
AATAGCTAG
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| Protein sequence | MGARGFLYYR PDGRRITQAD EIARLNSLAI PPAYTDVVIS TNPFSHLQAI GTDAKGRRQY
RYHKDWHAER GKAKFERLAD FASRLPDLRE RVDIDLRSRG LNVEKALATV VWMLDNLYIR
IGNAAYAETN KSFGLTTLRS RHVSVEGGSL KFRFKGKSGK EWNLAHSDRR IANVVRKLQE
LPGQHLFQYV CDQGGCRPIS SHDVNAYIRE MTGDDFSSRQ FRTWGATCMA VDALASAEAA
TTKRELARQL NAAIDAVAAK LVNTRSVCRS SYIHPAVFED FQAGTLRDVL KLKTTSERLL
QWMDEGEIQV LKWLKKQTVS NS
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