| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7259 |
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| Symbol | |
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| ID | 7380405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 216867 |
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| End bp | 217577 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641351 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002539648 |
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| Protein GI | 222102609 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGTG GCAAAGGCGA GCTCTATGAT GATCTCAAGC GCCAAATTCT GACGATGGAA
CTCGATCCGG ACGAAGATCT GGACGAAGTA TCGCTGAGTG AAAAATACGG CCTCTCGCGG
ACACCCGTCA GGGAAGTTTT CCGGCGTCTG GAAGGGGAAG GCTATGTCGA TATCCGCGCC
AACAAGGGTG CGCGAGTTAT CCCGATGAAC CATTCGACGC TGCGCCACTT CTTCCTTGTT
GCACCGATGA TCTACGCCGC CGTTGGGCGA CTTGCGGTCC AGAACTTCAA GCCCGGACAG
CTTTGCGACC TTCAGATCAC CCAGGAACGG TTTCGCGAGG CGAGCATGGC GCAGGATGCT
CTGGCCATGA CGCTTTCGAA CAACCGGTTT CACGCAATCA TCGGCGAGAT GTCGGGCAAT
GAATACCTTC AGCCAAGCCT TGGCAGGCTG CTGATCGATC ACGGCCGTAT CGGCCATACA
TTCTTTAGGC CGCGCAACGC AGACATGCAT GAGCGGCTAC AAAAATCAGT CGGACACCAC
GACGGCATTA TCGCCGCGAT CAGCGCGCGT GACGAAGATG CCGTCGTTGA TCTCGTGTTT
GAACACTGGG AATTGTCACG CGAGAACATG GAAATGTTCA TCGCTCCCCA AGCGCTTAAG
GCGGACGCAT TGGTCGATAC GCCAATGCAA TCGATGGAGA AATCATCATG A
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| Protein sequence | MKGGKGELYD DLKRQILTME LDPDEDLDEV SLSEKYGLSR TPVREVFRRL EGEGYVDIRA
NKGARVIPMN HSTLRHFFLV APMIYAAVGR LAVQNFKPGQ LCDLQITQER FREASMAQDA
LAMTLSNNRF HAIIGEMSGN EYLQPSLGRL LIDHGRIGHT FFRPRNADMH ERLQKSVGHH
DGIIAAISAR DEDAVVDLVF EHWELSRENM EMFIAPQALK ADALVDTPMQ SMEKSS
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