| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7250 |
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| Symbol | |
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| ID | 7380396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 207210 |
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| End bp | 208208 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641342 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002539639 |
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| Protein GI | 222102600 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.76914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCCT CCGATACCAA CGCCCCGGTC GACCGCCTGA AAATCGGCTT CGTGCTCGCG
AGATCATTCA CACTTTCGGC CTTCGCATTG TTCGTGGACA CGCTGCGCCT CGCCAGCGAT
GAATTCGATC GTTCAGGGCG GGTGCTGGCC GACTGGGACG TGCTCGGCAG CACGCGGCAC
CTGATCACCT CCAGCTGTGG CGTTCAGGTT GCACCGACTT CAGACCTGGT GGAAGATCCA
AGCCAGTTTC AATTCATCGT CGTCGTCGGC GGGTTGCTGA ACAACGAACA GCCAATCGAC
CGGGAAACGG CTGCGTTTTT GAAGAAGGCT GCCGCAAAAA ACGTCAAGCT GATCGGTGTC
TGCACCGGTT CTTTCATCCT GGCCGAACTT GGCTTGATGA AAAGCCATCG CACATGCGTA
AGCTGGCTGC ATTATAACGC ATTTCGGGAG CGTTTCCCCG ATCTTCAGGT TCGCTCCGAC
CGTATTTTCA ATCTCGACAG AACACGGGGC TCGTGTGTGG GCGGGAGTAG CGCTGCGGAC
ATGGCGGCGT TGATCGTCCG CCGTCACATC AGCAAGGATG CCGAAAGAAA TGCTCTCGAG
GTTCTTCACA TCGAGAAAGC CCGGTCAGCT CTTGCCATTC AAACACGCAA ACCGCTGTCC
ATCGAGTGCA ACGATCCCAG GATCAGAGCG ACGCTCATTA TGATGGAGCA GCATATCGAG
GGTAATCTAC CGATCCAGGA TCTGGCCGCA GCGGTTGGCC TATCCAGAAG ACAACTTGAA
CGTCTCTTTA TCAGCGAAAC CAAGAGCTCT CCGGCAATGA TCTACAGAAG AGTGCGATTG
GAGCGCGCAA AACATCTTCT TGTCCAGTCC AAAGCACCTT TGGTCGAAAT TGCGCTTGAG
GTCGGGTTCG GAAATGCGTC GCACTTCGCC AAGGTCTTTG CTCAGACGTT CGGCCAATCG
CCAACTGGCT TAAGAACAGC AATCCGAGCT ACTCTCTGA
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| Protein sequence | MTPSDTNAPV DRLKIGFVLA RSFTLSAFAL FVDTLRLASD EFDRSGRVLA DWDVLGSTRH
LITSSCGVQV APTSDLVEDP SQFQFIVVVG GLLNNEQPID RETAAFLKKA AAKNVKLIGV
CTGSFILAEL GLMKSHRTCV SWLHYNAFRE RFPDLQVRSD RIFNLDRTRG SCVGGSSAAD
MAALIVRRHI SKDAERNALE VLHIEKARSA LAIQTRKPLS IECNDPRIRA TLIMMEQHIE
GNLPIQDLAA AVGLSRRQLE RLFISETKSS PAMIYRRVRL ERAKHLLVQS KAPLVEIALE
VGFGNASHFA KVFAQTFGQS PTGLRTAIRA TL
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