| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7233 |
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| Symbol | |
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| ID | 7380384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 196120 |
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| End bp | 196920 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641331 |
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| Product | outer membrane lipoprotein |
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| Protein accession | YP_002539628 |
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| Protein GI | 222102589 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.302467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTCA AAGTTAAAAC GCTGCTTGCA GCCGCACTGA TTGCACTGTC TGGCAATGCG
TATGCCGAAA CCATCAAGGT GGGGGTTGTT CCCGGCGTCT ATGCCGATTC CATCGAGGCG
CTGGTGCCAG AAGCAAAAGC CGCCGGTCTG GATGTGCAGG TGGTGGAGTT CAGTGATTGG
ACCACCCCGA ACATTGCCCT TCAGGCGGGC GATATTGATG TCAATTATTT CCAACACAAG
CCATTTCTGG ACAATGCGGT GGCGCAGCGC GGCTATGATA TTGTGCCTGC GGGCATTGGT
ACCCTTGCCA ATATCGGCAT CTACTCTCTG AAATACAAGG ATTTTGCCAG CGTGCCGGAT
GGCGCAACCG TTGCCATTGC CAATGACCCG GTCAATCAGG GCCGTGGTCT GTTGCTGTTG
CAAAAAGGCG GGCTGATCAA GCTGAAAGAT GGTGTCGGGT TCAAGGGTTC GCTCGACGAT
ATCGTCGACA ACCCAAAACA CGTCACGTTC ACGGAAGTGG AAGGTCCTCA ACTGGCCCGC
ATCACTCGCG ATGTCGATCT AGCCCTTGGC TATCCTCACT TTATTGTCGC CGCCAAGGCG
TTTGATCCCA GCTCCGGTCT GATCTATTCC GGCGTGGATG ACAAGCAGTT CGCCATCGTC
TTTGCCGCAC GAAAGGACAA GGCCGATAGT CCAGCCTTGA AGAAATTGGT GGACATCTAT
CAGCACTCCG ATGCCGTGAA AGCTGCAATC GATAAGGCGT TCGGCAATGA TCGCAAGCTT
TACACGCTGG CATGGCAGTA G
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| Protein sequence | MTFKVKTLLA AALIALSGNA YAETIKVGVV PGVYADSIEA LVPEAKAAGL DVQVVEFSDW
TTPNIALQAG DIDVNYFQHK PFLDNAVAQR GYDIVPAGIG TLANIGIYSL KYKDFASVPD
GATVAIANDP VNQGRGLLLL QKGGLIKLKD GVGFKGSLDD IVDNPKHVTF TEVEGPQLAR
ITRDVDLALG YPHFIVAAKA FDPSSGLIYS GVDDKQFAIV FAARKDKADS PALKKLVDIY
QHSDAVKAAI DKAFGNDRKL YTLAWQ
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