| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7227 |
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| Symbol | nocP |
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| ID | 7380380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 192268 |
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| End bp | 193029 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643641327 |
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| Product | ABC transporter nucleotide binding/ATPase protein (nopaline) |
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| Protein accession | YP_002539624 |
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| Protein GI | 222102585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.589012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGAGC TCTCCAATAT CGAAAAGCGT TTCGGTGAGG CTGTTATCCT GAATGATATC
AACCTGCGCA TCCCGGAAGG AAATGTTACG GCGCTAGTCG GACCGTCCGG AGGTGGCAAA
AGCACGTTGC TGCGCTGCAT CAATTTGCTG GAAATCCCGA CAATCGGCAC CGTTAAAATC
GGCGAAGCAA GTCTGACATT TGCACCCGGA CAAAAAAACG GTTGGCAATC CATTCAGAAA
ATTCGCCGCC AGACCGGAAT GGTTTTTCAA AATTTTCAAT TGTTTCCGCA TCAAACAGCC
ATCGAAAATG TGATGGAAGG CTTGGTCACC GTGCTGAAAT GGCCAAAGGA AAAAGCGCGT
CAGCGCGCCA TTGAGCTGCT GAACAAGGTG GGCATGGCCC ACAAAGCGGA TGCCTGGCCA
TCCACTTTGT CTGGTGGCCA GCAGCAACGC ATTGCCATTG CCAGAGCCTT AGCACCGTCG
CCGCGTGTTT TATTGTGTGA CGAGCCAACA TCGGCACTGG ATCCGGAACT TGCGGCAGAG
GTTGTGGATG TGTTGAGCCG ATTGGCCGGG GAGGGGACCA CCATGGTCAT TGCCACGCAT
GATCTCCGGC TTGCCTCAAA GATCGCCAAC GATGTTGTTT TCCTTGAAGC AGGTCGCGTC
GTTGAAACCG GCAGTGCGAA AAATATCTTC ACGGTCCCGC AACAGGACCG CACAAAGCGT
TTCATCTCCA CGATCAATGC CGCACATAGC TACGACATCT AG
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| Protein sequence | MIELSNIEKR FGEAVILNDI NLRIPEGNVT ALVGPSGGGK STLLRCINLL EIPTIGTVKI
GEASLTFAPG QKNGWQSIQK IRRQTGMVFQ NFQLFPHQTA IENVMEGLVT VLKWPKEKAR
QRAIELLNKV GMAHKADAWP STLSGGQQQR IAIARALAPS PRVLLCDEPT SALDPELAAE
VVDVLSRLAG EGTTMVIATH DLRLASKIAN DVVFLEAGRV VETGSAKNIF TVPQQDRTKR
FISTINAAHS YDI
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