Gene Avi_7215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7215 
Symbol 
ID7380373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp184832 
End bp186025 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content59% 
IMG OID643641320 
Producthippurate hydrolase 
Protein accessionYP_002539617 
Protein GI222102578 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCCT CTCCAGACCC ACTACCGTCT CCACATGTGA TTGATCGCAT AGCCAGCTAT 
ACACCAGAGC TGACAGCTAT CCGCCACGAC ATTCACCAGC ACCCGGAAAT CGGGTTCGAA
GAGGTCCGAA CGTCAGGCAT TGTCGCCGAA AAGCTCACCT CATGGGGCAT TGAGGTGCAT
CGCGGCTATG GCAAAACCGG CGTGGTGGGA CGCTTGCGCG GCAAACACGC TGGCAACCGC
TCCATAGGGC TGCGCGCGGA TATGGATGCC CTGCCGATGC CAGAGGAAAC AGGGCTGCCG
TTTGCCTCCG TCTATCCCGG CAAGTTTCAC GGCTGCGGCC ATGATGTGCA CACCACCATC
TTGCTGGGCG CGGCCCGCTA TCTGGCAGAA ACCCGCGATT TTGCGGGCAC GGTCACCTTC
ATTTTTCAGC CCGCCGAGGA AGGGCTTGGC GGCGCGAGGG CGATGATTGC TGATGGTTTG
TTCAAGGATT TTCCGGTTGA TGAAATCTAT GGGCTGCACA ATTCATCCTA TTCTCCACCC
AATCACTTGA GAGTATCGCC GGGTGCCGCT ATGGCCGGGG CCGATTTCTT TGATATCACC
TTGCGCGGCA AGGGTGCGCA TGCTGCCCAT CCCGATTTGG GGCGTGATCC CATTCCGGCC
GTTGGTGAGT TGATTCAGGC CCTACAAACC ATTGTGAGCC GCAATGTTCC GCCCACCGAT
CCTGCCGTGT TGTCGATCAC CCGGATTGAA GGCGGATCAG CCTATAATGT CATTCCCGAA
ACCGCCTCGA TTGCCGGAAC GGTACGGGCC TTTTCCGATG AGGTGCGGCA AACCATTCGC
ACCCGCATCA CCGAAATTTC CAATCACATT GCCGCCGCTC ACGGGCTGAC AGCCACGGTG
GATATTCGCG ACATTTTCTC CGTGCTCACC AACAATGACA CAGCAGTTGA GGCTGTGGTG
TCTGTTGCCC GCGAGGTGCT GGGGGATGCA CGGGTCTCCA CCCAACCCTA TCGCACCATG
GGCAGCGAGG ATTTCGCCGA CTTGCTCAAG CACGCCCCCG GTGCGTTTTT CACCCTCGGC
CACAGCGGCA CGGTGCCCGC CCACAATCCC GGCTTCATTG TTGATGATGC CATTCTGCCC
GTCGGGGCAA CCCTGTTTTC CCGGCTGGTG GAAAGCAGGC TGAAGGCCGC CTGA
 
Protein sequence
MTSSPDPLPS PHVIDRIASY TPELTAIRHD IHQHPEIGFE EVRTSGIVAE KLTSWGIEVH 
RGYGKTGVVG RLRGKHAGNR SIGLRADMDA LPMPEETGLP FASVYPGKFH GCGHDVHTTI
LLGAARYLAE TRDFAGTVTF IFQPAEEGLG GARAMIADGL FKDFPVDEIY GLHNSSYSPP
NHLRVSPGAA MAGADFFDIT LRGKGAHAAH PDLGRDPIPA VGELIQALQT IVSRNVPPTD
PAVLSITRIE GGSAYNVIPE TASIAGTVRA FSDEVRQTIR TRITEISNHI AAAHGLTATV
DIRDIFSVLT NNDTAVEAVV SVAREVLGDA RVSTQPYRTM GSEDFADLLK HAPGAFFTLG
HSGTVPAHNP GFIVDDAILP VGATLFSRLV ESRLKAA