| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7192 |
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| Symbol | |
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| ID | 7380352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 157849 |
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| End bp | 158775 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641300 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002539597 |
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| Protein GI | 222102558 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.906692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCC AAACCCTACG TCCTTTTTCG AAACGCCACA GGTGGCGCAG GATTTCCCCC
GTCACGATCT TGGCGGGTGC CTTGGCCGTC GTGTTGGTGC TGGCTGCCTT GTTTGCCCCG
CTTCTTGCGC CCCATGATCC GTTCAATCCG GCAACGCTGG ATTTGATGGA TGGCATGACA
CCGCCCATGG CCGCCAATGC CTTTAGTTGC AAAGTGTTTT GGCTGGGCAC AGACAATCAG
GGCCGTGATA TTCTCTCGTC CATTCTCTAT GGCAGCCGGG TGTCCTTGCT GGTTGCCTTT
TCCGCCACGC TTTTATCGCT GGCTTTGGGT GTTGGTGCGG GGCTAATCAG CGGTTACGCA
GGCAATGCCG TGGATGCCGT GATCATGCGC GTTGCCGATG CGCAGCTGAC CTTCCCGACC
ATTCTGGTCG CCCTGCTGAT CTTTGGCATT GCCCACGGCA TCATTCCGGC ATCACAGCAG
GAACAGGCTG CGGTGTGGAT TCTGATTTTC GCCATCGGCT TTTCCAACTG GCCCCAATTT
GCCCGCACCG TGCGCGGGGC CGTGCTGGTG GAAAAACGCA AGGATTATGT GGCGGCTGCA
AAGCTCATCG GCGTCAGCCG CAGCCGCATT CTGCTCACGC ATATCCTGCC CAATATTGCC
GGGCCGGCTC TGGTGATTGC CACCATCGGT CTGGCGCTTG CTGTCATTGA AGAGGCAACC
CTGTCCTATC TTGGTGTTGG CGTGCCGCCC ACGCGGCCGT CGCTTGGTAC GCTGATCCGC
ATTGGCCAGC AATTCCTGTT TTCGGGGGAA TGGTGGATTA TCGGTTTTCC CGCTGCCACG
CTGGTTCTGC TGGCCCTGTC CGTCAATCTG TTGGGAGACC GCTTGCGCGA TGCGCTCAAC
CCGCGCCTGA GGAACAATCG CCGATGA
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| Protein sequence | MTTQTLRPFS KRHRWRRISP VTILAGALAV VLVLAALFAP LLAPHDPFNP ATLDLMDGMT
PPMAANAFSC KVFWLGTDNQ GRDILSSILY GSRVSLLVAF SATLLSLALG VGAGLISGYA
GNAVDAVIMR VADAQLTFPT ILVALLIFGI AHGIIPASQQ EQAAVWILIF AIGFSNWPQF
ARTVRGAVLV EKRKDYVAAA KLIGVSRSRI LLTHILPNIA GPALVIATIG LALAVIEEAT
LSYLGVGVPP TRPSLGTLIR IGQQFLFSGE WWIIGFPAAT LVLLALSVNL LGDRLRDALN
PRLRNNRR
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