| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7173 |
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| Symbol | dppC |
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| ID | 7380338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 140576 |
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| End bp | 141454 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641286 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002539583 |
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| Protein GI | 222102544 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTG TTGAAATTCT CTCCCTGCAA GCCAATGGCG TGAAATCGGA TAGCGTCAAG
CGCCGGGCGT CCCTCACCCG TTTTAAAGGC TTGCGCCCCG GTCTTGTGCT GGCGTGGGTG
GTCATGGTCA CCGTACTGCT CTGGGCAGCT ATGCCGTGGC TTTTTACCAG CTATAACCCG
CTGGAGGGCA TTCCCGGCGG GCAGTTGAAA GCGCCGTCAG CGGCGCATCT TCTCGGCACG
GACTCCCTTG GGCGCGATCT TTATGCGCGG ATGGTCTATG GCTCCGTTCA TTCGCTGTCG
GGTGCCCTTG CCGCCGTGGG CGTGGGACTG GTGGCAGGCA CCCTGCTTGG CCTTTTTGCC
GGAGCCATTG GCGGGCGCTG GGATATGATC ATCATGCGCT TTGTCGATGT GCTGCTGTCT
ATTCCCACCC TGCTTCTGTC TCTCAGCATC ATTATTCTGC TTGGCTTTGG CACGATCAAT
GCCGCGATTG CGGTGGGTGT TACGGCCATT GCCGGTTTTG CCCGGTTGAC CCGATCCGAA
GTGGTGCGGG TGCGGCGGGC GGATTTTGTT GAAGCGGCCT ATGGCAGTGG CGGTACGTTT
TTGAGCGTGC TGTGGCGGCA TATCTTGCCC AATTCGCTGA CCTCGGTGAT TGCCTATGCC
GCCGTGCAAT TTGGCTGGGC CATTCTGCAA ATGTCCACCC TAGGATTCCT CGGCTATGGC
GCACCGCCGC CAACACCGGA ATGGGGCCTG CTGATTTCCG AAGGGCGCAA TTACCTCGCC
ACCGCCTGGT GGCTGACCAC AGCCCCCGGC CTGATTGTGG TCGCCGTGGT GCTGTCTGCC
AACCGCATCA GCCAATCCTT GGGGAGCACC AGCCGATGA
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| Protein sequence | MSSVEILSLQ ANGVKSDSVK RRASLTRFKG LRPGLVLAWV VMVTVLLWAA MPWLFTSYNP
LEGIPGGQLK APSAAHLLGT DSLGRDLYAR MVYGSVHSLS GALAAVGVGL VAGTLLGLFA
GAIGGRWDMI IMRFVDVLLS IPTLLLSLSI IILLGFGTIN AAIAVGVTAI AGFARLTRSE
VVRVRRADFV EAAYGSGGTF LSVLWRHILP NSLTSVIAYA AVQFGWAILQ MSTLGFLGYG
APPPTPEWGL LISEGRNYLA TAWWLTTAPG LIVVAVVLSA NRISQSLGST SR
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