| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7144 |
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| Symbol | |
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| ID | 7380182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 112177 |
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| End bp | 113175 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641260 |
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| Product | OmpA family protein |
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| Protein accession | YP_002539557 |
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| Protein GI | 222102518 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGAT TCCGAACAGG CCTCGCGACC CTCGCTCTCA TCACGGTCCT GGGCTTACCG
AAATTCGCCG CGGCCGAAGC GCCGTCGCAG GATATTGAAG GCGGCAAGGA CAATCCGATT
GTGTCGCGTT TTTCTGGTGC GGTGATTATT GGTTACCAAC AGCAGGACTA CGCAGCGCTG
ACCTTGCCAC TGGGACCGTA TGACGCCAGC CAGAAAAGCC ACTTTGCCAA GAGCAAGACC
GTTGAAGGCC GCCTGACCAG CATCGCATAC GCCATCCCCG AAGGAAAAAC GGCGCTAGAA
GTCTATCGCA ATTACGAACA GACATTGAGG GCAGCTGGTT TTCAGCCGGC CTACCAGTGT
GAAGGCAGCG CCTGCGGTGG CTATGACTTT GCCGCAGCAC TTGCCGACCC GATCAATCAC
GCCATGGGTG ACAACCTTTT CAATCTCAGG ATTGATCTGA TCAACGCCAC CGATGGAAAC
GTGCGGGCGA TGACGGCTCA TCTGGAGCGC CCCCAAGGGC CCGTCGACGT TTCCTTGCTG
GTAAGCCAGG ATAGCGGTAG ACAGCCCGGT TTGCTGCTAC AAATCCTGGA AGGCCGCGCT
ATGGAGACGG GTGAGGTCAC TGCGGACGCC CAGGCAATGA GTGATAGTCT GGCCAAAACC
GGCCACATCG CGCTCTATGG CATCCAGTTC GAAACTGATA GCGCAGCCTT GAAGGCGGAA
TCGGACAAAA CGCTGGCACA GATGGCCGAG TTTCTGACGC AGGACGTGAG CCGAAAGGTC
TATATCGTTG GCCATACCGA CAGTTCAGGG GCTTTGGAGC GCAATATGAA CCTTTCGCAG
GCGCGTGCGG CGGCTGTCGT GAAAGCTTTG ACAGCCAAAT TCGGTATCGA CTCTGATCGG
CTTCAGCCCA AGGGCATCGG TCCCTATGCG CCGGCGGCCA GCAATGCAAA CGACGCGGGT
CGGGCCAAGA ACCGCCGGGT TGAAATGGTC GAGAGATAG
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| Protein sequence | MSGFRTGLAT LALITVLGLP KFAAAEAPSQ DIEGGKDNPI VSRFSGAVII GYQQQDYAAL
TLPLGPYDAS QKSHFAKSKT VEGRLTSIAY AIPEGKTALE VYRNYEQTLR AAGFQPAYQC
EGSACGGYDF AAALADPINH AMGDNLFNLR IDLINATDGN VRAMTAHLER PQGPVDVSLL
VSQDSGRQPG LLLQILEGRA METGEVTADA QAMSDSLAKT GHIALYGIQF ETDSAALKAE
SDKTLAQMAE FLTQDVSRKV YIVGHTDSSG ALERNMNLSQ ARAAAVVKAL TAKFGIDSDR
LQPKGIGPYA PAASNANDAG RAKNRRVEMV ER
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