| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7125 |
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| Symbol | |
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| ID | 7380169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 99745 |
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| End bp | 100434 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641247 |
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| Product | hydrolase |
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| Protein accession | YP_002539544 |
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| Protein GI | 222102505 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTGT GGGATCGATT TCTGACTGAC GATGACAAGC TTGTGGTGGC GCGGCGTGCG
CGGCGCCCAT TGAATGGACC GGGCCGTCGC AATGCCCTGC TGATCATTGA TATGCAGGTC
ACGGCCTGCG GTCTCGACAA GCCGATTTAT GAGCAGCTTG ATCTTTACTC GGGTGCCTGC
GGTCCTCACG CCTGGAAAGC CATACCGGTG CAACAACGCT TGCTGGCGGC GGCACGCGCC
GCGCAGATGC CCGTGATTTA CTCCAAGCAT GTATTCTACG ACATCAGTGG CCTTCCCGAA
GCGCGGTCCG ACAATAACTT CAGCGCCCGC AATGCAAAAT CCGATATTCC GCCAGAGGTT
GCCATGCAGT CTGGCGATCT TCTGGTGGAA AAACAGACCC CAAGCTGTTT TGCCTTCACC
AACCTACATT TGATGTTGAG CAATCTGAAT GTCGACGGTC TGTTCCTGGC AGGCAATAGC
ACCAGCGGCT GCGTGCGGGC CACCGCTGTG GATGGTACGG CTCTTGGTTA TAAAATTCAG
GTCATCGAAG AGGCGGTGTT TGATCGCATC GAAATGTCCC ATGCGGCCGC CTTGTTCGAT
ATGCAGTTTA AAATCTGTGA TGTGATCAGC GAAGACGAGG CGTTGAGCCA GTTTAGCAGT
CATGGTGCAC GCAAAATCCA GGCTGCCTGA
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| Protein sequence | MAVWDRFLTD DDKLVVARRA RRPLNGPGRR NALLIIDMQV TACGLDKPIY EQLDLYSGAC
GPHAWKAIPV QQRLLAAARA AQMPVIYSKH VFYDISGLPE ARSDNNFSAR NAKSDIPPEV
AMQSGDLLVE KQTPSCFAFT NLHLMLSNLN VDGLFLAGNS TSGCVRATAV DGTALGYKIQ
VIEEAVFDRI EMSHAAALFD MQFKICDVIS EDEALSQFSS HGARKIQAA
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