| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7090 |
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| Symbol | |
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| ID | 7380146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 80521 |
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| End bp | 81390 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641225 |
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| Product | ABC transporter membrane spanning protein (urea/amide) |
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| Protein accession | YP_002539522 |
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| Protein GI | 222102483 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTGT CGGATATGCT GGAATTGTTA ATACAGGGTT TGACGCTGGG TGGTCTCTAT
GGCCTCGTGG GTGCTGGCCT TGCCTTGAAC TTTGGCGTGC TGAAGGTGGT TAATCTCGTT
CATGGCGAGT TGATTACCTG TGGTGGTTTT ATCGCAGCCT TTTGCTTGTC CATGGTGCCC
AATATGCCTT TTCCGCTCAT TCTGGTGCTG GCGATGGCTG GCACAGCACT GGTGGGGGCG
GGCCTTCAGG CGCTTGTTGT CGAGCGGGCC ATGACAACGC GCGATCCCAT GGTGACTATG
CTTGTCACCT TCGGACTGGG CATTGTTGCA CGCAATGTGA TGGTCGAGCT TTTCGGCGCG
GACCTGCGGG GACTTGATGT GGGCGGTCTC AGCCATGCCC GCCTCCAGAT CGGTACGGTT
TCCGTGGGCG TTTTGCCCTT GATGACCTTT GCCTTCGCTC TGGCGGCCTT TGCGGTACTG
CATGTTCTGG TCAACATGAC GGCCTTTGGA CGCGCGGTGC GCGCCACATC GGATCGGCCC
GACATTGCAA GGTTGATGGG GGTTCGGGTG CGAACACTCC ACATCAAAGT CGCGGCCCTT
GCCGCCGCGC TGGCCGCGTT GGCGGGGATG TTGCTGGCGA TGCGGGCGTC AATCTCGCCC
TATTCCGGGG TTGAACGTTT GATCGTGGCC TTCGAGGTGG TGGTGCTCGG CGGGGTCGGG
TCTATTCGTG GAGCGCTGAT CGCCGGTCTT GTGCTTGGAA CTGCACAGGT TGTTACCGCC
CGTTTCGATG GCAACGCGGG CCTGCTTTAT GTCCACCTGA CGTTTCTTGC AGGTCTTGGT
CTGCGTGCTT TCCGGGGGAA ACTCTCATGA
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| Protein sequence | MTLSDMLELL IQGLTLGGLY GLVGAGLALN FGVLKVVNLV HGELITCGGF IAAFCLSMVP
NMPFPLILVL AMAGTALVGA GLQALVVERA MTTRDPMVTM LVTFGLGIVA RNVMVELFGA
DLRGLDVGGL SHARLQIGTV SVGVLPLMTF AFALAAFAVL HVLVNMTAFG RAVRATSDRP
DIARLMGVRV RTLHIKVAAL AAALAALAGM LLAMRASISP YSGVERLIVA FEVVVLGGVG
SIRGALIAGL VLGTAQVVTA RFDGNAGLLY VHLTFLAGLG LRAFRGKLS
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