| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7088 |
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| Symbol | rbsA |
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| ID | 7380144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 79081 |
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| End bp | 79842 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641223 |
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| Product | ABC transporter nucleotide binding/ATPase protein (ribose) |
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| Protein accession | YP_002539520 |
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| Protein GI | 222102481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGGT CGTCTGAGGC TCAGGACAAT GTCATTCTGC GCATCGACAA TCTGAACAAG
AGCTTTCAAG CCCTCCATGT CACTCGTCAG GTGACATTTG ATTTGTTGAG CGGAGAATGT
GTCGGCCTCA TTGGGCCGAA TGGTGCGGGA AAAAGCACTC TGCTGGGCCT GCTTTCGGGC
AGTCTCAGGC CGGATTCCGG AACACTCACG CTGGATGGTG CCAACGTAAC CCCGTTTGCG
CAATTCAAAA GGGTTCGCAG CGGGATTGCC AAGGCAAGCC AGATTCCCCA GACGTTTGAT
CGCCTGCTGG TGTTCGACAA TGTTCGGGTT GCGGCGCTGT ATGGGGCTGG AATCCGTGAA
AAGGAAGCGG CAGACTGGAC AGCGGATGTT CTGAGCCAGT GTGGGCTTGG CGATAAAGCG
CGGCGCGAAA CCCGCACCCT TGGCCTTCTG GATCGAAAAC GGCTGGAACT GGCAAAGGCC
GTGGCCGCAC GTCCGCGCGT GTTGTTACTC GATGAAGTGG CAGCCGGACT GACGGAGCCA
GAAATTCTCG AAATCGTGAA GCTGGTCGAG CGGTTAAAGC CGGGTCGTGC GACGGTTTGG
GTTGAGCATA TTCCCTATGC CCTTCGAGAT GTCTGCGAGC GCCTCATCCT GATGGATGCC
GGGGCCAAGC TGCTCGATGG TCCATTCCAC ACCGTCTGGC AGGATCCGAA ATTGCATCAG
ATCTACATGG GGGTTCCCGA TGGCACCACT TTTGACGTTT GA
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| Protein sequence | MHRSSEAQDN VILRIDNLNK SFQALHVTRQ VTFDLLSGEC VGLIGPNGAG KSTLLGLLSG
SLRPDSGTLT LDGANVTPFA QFKRVRSGIA KASQIPQTFD RLLVFDNVRV AALYGAGIRE
KEAADWTADV LSQCGLGDKA RRETRTLGLL DRKRLELAKA VAARPRVLLL DEVAAGLTEP
EILEIVKLVE RLKPGRATVW VEHIPYALRD VCERLILMDA GAKLLDGPFH TVWQDPKLHQ
IYMGVPDGTT FDV
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