| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7084 |
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| Symbol | |
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| ID | 7380140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 74891 |
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| End bp | 76069 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641219 |
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| Product | dehydrogenase |
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| Protein accession | YP_002539516 |
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| Protein GI | 222102477 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.175296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTCCG CTCTTTTTGC TTCGGCGGGG CATCGCTTGC GCGATGTCCT ATCTCTTGAT
GATTTCGAGG TTCTGGCGAA ACGTCATTTG CCGGGGCCGC TCTTTGGATA CATTGCCGGG
GCAAGCGAGA CCAATGCCTC GTTGCGCATG AATGCCGAGG CGTTCAGGGA CATAAGCCTC
ACGCCACGGG TTCTCAGAAA CGTTTCGACC AGAACCACAA AGACAATCTT GTTCGGCGAG
GAATGGAGCG CACCGTTTGG GATCGCGCCG ATGGGTATAA GCGCCCTGAT GGCCTATCGC
GGCGATCTCG TTCTTGCCAA GGCTGCGCAG GATGCCGGGA TTGCCATGAT CATGAGCGGC
TCATCCCTGA TACGGTTGGA GGAGATTATC GAAGCTGCAC CTCGATCATG GTTTCAAGCC
TATCTACCGG GCGAGCCGGA CCGGATCGAT GGATTGATAG ATCGCGTGGC TTCGGCAGGC
TACAAAACTC TTGTTCTGAC GGTGGATACC GCCGTACTGG CCAATCGCGA AAACAATATC
CGCGCTGGCT TCTCGACACC TCTTCGGCCA AGCCTTCGTC TTACCTGGCA GGGAATGACC
CATCCGGCAT GGACGATTGG GACTTTCGCA CGAACGATAC TCACTCACGG CATCCCCCAT
TTCGAGAATT CGTATGCGAC ACGCGGCGCG CCGATCATTG CGTCGAACGT CATGCGAGAC
TTCGGCAAGA AGGATCATCT GAGCTGGGGC CATTTCAGCC GTATCAGGCA AAGATGGACG
GGGAACCTGG TCGTGAAGGG GATACTTCAT CCCGAAGATG CAGCCATGGC CGCAGAGCGT
GGGGCAGATG GTATCATCGT GTCCAACCAT GGCGGCAGAC AACTTGATGG CGCTATAGCC
CCGATGAAAG CTCTGCCTGC GATAGTGGAT AGAGTAGGAT CAGACACGGT CGTCATGATC
GATGGTGGTA TTCGTCGGGG GACAGATATG GTAAAAGCCC TCGCGCTTGG TGCAAAATTT
GTGTTCGTAG GCAGGCCGTT CGTCTACGCC GTGGCGGTAG GTTCAAAAGC GGGTGTCGCG
AAAGCCACCA GCATTCTTTC AGATGAATTG CATAGGGATA TGGGGCTGTT GGGTGTGACA
GAAATTATTG AGCTTCCATC AATTCTTACT CGCATCTGA
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| Protein sequence | MVSALFASAG HRLRDVLSLD DFEVLAKRHL PGPLFGYIAG ASETNASLRM NAEAFRDISL
TPRVLRNVST RTTKTILFGE EWSAPFGIAP MGISALMAYR GDLVLAKAAQ DAGIAMIMSG
SSLIRLEEII EAAPRSWFQA YLPGEPDRID GLIDRVASAG YKTLVLTVDT AVLANRENNI
RAGFSTPLRP SLRLTWQGMT HPAWTIGTFA RTILTHGIPH FENSYATRGA PIIASNVMRD
FGKKDHLSWG HFSRIRQRWT GNLVVKGILH PEDAAMAAER GADGIIVSNH GGRQLDGAIA
PMKALPAIVD RVGSDTVVMI DGGIRRGTDM VKALALGAKF VFVGRPFVYA VAVGSKAGVA
KATSILSDEL HRDMGLLGVT EIIELPSILT RI
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