| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7040 |
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| Symbol | |
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| ID | 7380235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 38508 |
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| End bp | 39440 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641183 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002539480 |
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| Protein GI | 222102441 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGT TGCCAAATCC TATGATTGAC GGACATCGCC AATCGATGCG AGACCAGCTG
GTAGAATTGG CCGGCGGTCT AGCCACGCGT CACGGATACA ATCCGACCGG ACTCGATCCC
GTTCGCATTC TGCGCACTGA GGCCGTGCTC CACGATGTCC CGGTCCTCTA TAACCCAGGC
GCGGTGTTCG TCCTTCAGGG CAGCAAGCAG GGCATGCTGG ACGGAGAAAT CTTCCGCTAC
GATGAAGACC ACTATCTGGC TGTTTCTGTC CCCGTGCCTT TCCGGATGGA ATCGACCGCC
AGTCCGAAGC GGCCATTGCT TGCGGTCTAT CTCGAATTCG ATATGCAGTT GGCGGCTGAG
ATCGCCCTGC AGGTCGAAAA GCGCAGCGAG CTTGCTGGTC ATCCGCCACG CGGTCTGATG
TCGAACAAGA TGGATGCTGA CATCGAGGAC GTCCTGTTAC GCCTGTTGAG GGCGCTTCGC
AGTCCGGTCG AAAGTGCCGT TCTGGGTGCG GGCATTCTGC GCGAACTGCA CTATCGGGTG
CTGGTCGGTC CGCAAGGCGG CGCAATGATT GCCGCGCTTC AGCACAGTGG GCCATACGGG
AAAATCTTCC GGAGCCTGGC CTGGCTGCGG GAGCACTACA GCACTGAAAT CTCCATCGCC
GACCTGGCAG GCAGGGTGGG CATGAGCGTG CCGTCCTACC ATGTGCATTT CAAGGACCTG
ACTTGCACCA GTCCGATGCA ATACGTGAAG GCCATGCGGC TGCACGAAGC AAGATTGATC
ATCGCCCGCC AGGAAAAGAC GATTGCGATG GTCGCGACGT CAGTCGGTTA TGCAAGCCCG
GCCCAGTTCA GCCGAGACTT TAAGCGACAT TTCGGTCGCA CAGCGTCGGA GGAGGCCAAA
TGGGTCAGAC ACCACCTTGG CGAACTCGTC TGA
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| Protein sequence | MKLLPNPMID GHRQSMRDQL VELAGGLATR HGYNPTGLDP VRILRTEAVL HDVPVLYNPG
AVFVLQGSKQ GMLDGEIFRY DEDHYLAVSV PVPFRMESTA SPKRPLLAVY LEFDMQLAAE
IALQVEKRSE LAGHPPRGLM SNKMDADIED VLLRLLRALR SPVESAVLGA GILRELHYRV
LVGPQGGAMI AALQHSGPYG KIFRSLAWLR EHYSTEISIA DLAGRVGMSV PSYHVHFKDL
TCTSPMQYVK AMRLHEARLI IARQEKTIAM VATSVGYASP AQFSRDFKRH FGRTASEEAK
WVRHHLGELV
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