| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3270 |
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| Symbol | |
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| ID | 7315498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3421122 |
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| End bp | 3422342 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643618171 |
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| Product | general secretory pathway protein F |
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| Protein accession | YP_002515325 |
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| Protein GI | 220936426 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.741471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGTT TCAGCTACCG CGCCCGCAAT GCCCAGGGCC AGCCCATTGA CGGCCAGATG
GAGGCGCCGA CCCTGATGGC CGTTGCCGAC CAGCTGAGCA GCGACGGGTT CATCCCCGTG
GACATCCAGC CACTGCGCGC CGGCGGCGCC TCGCTGAACA TGCCTATCCG CCTGCCGCCG
AGGCGTCCAT CCAGCAGCGA GATCACCCTG CTAGCGCGCC AGCTCTACGC CCTCACCAAG
GCCGGCGTGC CGATCATCCG GGGTCTGAAC CAGCTGGCCG ATGCCAGCAA GAACGAGCGC
ATGTCCAAGG CCCTGCGCGA GGTGGTGGAC GACCTGGAAT CCGGGCGTGA TCTCGCCGGC
GCCATGGCGC GCCACCCGGA CATCTTCAGT CCCCTGTTCG TGAGCATGGT GCAGGTGGGC
GAGGCCTCGG GTCGGCTGGA TGATGCCCTG CTGCGGGTGT TCAACTACAT GGAGCGCGAG
CGCCAGACGG TGAACCAGAT CCGCACCGCA TTGCGTTATC CCACCTTCGT GGTGATCGCC
ATCAGCGTCG CCATCTTCAT CCTCATGGCC TACGTGATCC CGGTATTCGC CCAGGTGTTC
GAACGCTTCG ACCTGGACCT GCCCCTGGCC ACCCGCGCGA TCATCACCGT GTCCAATTTC
GTGTCCGCCT GGTGGTGGCT GATTCTGGGT GGTGTTGCCG CAGCCTGGTT CGGATTCCGC
CAATGGACCC GGCGCGACGA CGGACGACTG TGGTGGGACC GCCAGAAGCT GCGTTTCCCG
GTGGTGGGTG ACATCGTGCT GCGCGCCTCG CTGGCTCGTT TCGCCCGGGC CTTCGCCATG
GCGTCCCGTT CCGGCGTGCC CTTGTTGCAG GCCCTGAACG TGGTCTCTCG AACGGCCGAC
AACGCCTACA TCGCCGGCAA GGTCCGGGGC ATGCGCGAAG GCATCGAGCG TGGCGAAACC
ATCGCCCGCA CCGCCGCTGC ATCACGCGTG TTCACGCCCC TGGTGATGCA GATGATCGCC
GTGGGCGAGG AGACCGGCCA GGTGGACGAG ATGCTCGACG AGGTGGCCGA GTTCTACGAA
ACCGAGGTGG ACTATGACGT TCGTCGGCTG GGCGAGACCA TCCAGCCGGT ACTGGTCGTG
GCAGTGGGCG TGATCGTCTT TATCTTGGCA TTGGGGGTCT TCCTGCCCAT GTGGGACCTG
ACCCAGATCG CAGGTCGATG A
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| Protein sequence | MPRFSYRARN AQGQPIDGQM EAPTLMAVAD QLSSDGFIPV DIQPLRAGGA SLNMPIRLPP
RRPSSSEITL LARQLYALTK AGVPIIRGLN QLADASKNER MSKALREVVD DLESGRDLAG
AMARHPDIFS PLFVSMVQVG EASGRLDDAL LRVFNYMERE RQTVNQIRTA LRYPTFVVIA
ISVAIFILMA YVIPVFAQVF ERFDLDLPLA TRAIITVSNF VSAWWWLILG GVAAAWFGFR
QWTRRDDGRL WWDRQKLRFP VVGDIVLRAS LARFARAFAM ASRSGVPLLQ ALNVVSRTAD
NAYIAGKVRG MREGIERGET IARTAAASRV FTPLVMQMIA VGEETGQVDE MLDEVAEFYE
TEVDYDVRRL GETIQPVLVV AVGVIVFILA LGVFLPMWDL TQIAGR
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