| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3267 |
|---|
| Symbol | |
|---|
| ID | 7315495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3419576 |
|---|
| End bp | 3420016 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643618168 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002515322 |
|---|
| Protein GI | 220936423 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.347086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCAC GGGGTTTTAC GCTGATCGAG CTGGTCACGG TCATCCTGCT GCTGGGTGCG
GTCTCGGTTT TTGCCCTGCC GCGCCTGATG GACCGCACTG GTTTGGACGC CGCTGCCTTC
GAACAGGAGT TGAAGGCGGC GTTTCGTCAC GCCCGTGCCC TTGCTTCCGC CTCCGGCTGC
GAGGTACAGG TGCGGGTGAC GGCCGGGGAG TACGGGGTCT TCCTGCGCGC AGATGCCGCA
GGCCAGTCCT GTGGCAGCGG TGGTTTCACC CAGGCGGCAC GACAGCCGGT ACGGGGTGGC
GCTTACCAGG GAACCGTGCC GTCCGGGCTG ACCGTAGGCG CGCTCACGGT CACCTTCGAC
GGGCTGGGTC GTTCCAGTGG TGGCAGTATC AGTGTCGGGC CCCGAACCAT CACGATTTCC
AGTGCCGGTT ATGTTGGTTA A
|
|---|
| Protein sequence | MRSRGFTLIE LVTVILLLGA VSVFALPRLM DRTGLDAAAF EQELKAAFRH ARALASASGC
EVQVRVTAGE YGVFLRADAA GQSCGSGGFT QAARQPVRGG AYQGTVPSGL TVGALTVTFD
GLGRSSGGSI SVGPRTITIS SAGYVG
|
|---|
| |