Gene Tgr7_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3166 
Symbol 
ID7317396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp3315923 
End bp3316597 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID643618065 
Productprotein of unknown function DUF162 
Protein accessionYP_002515222 
Protein GI220936323 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CCCGAGACAA GATCCTCGCC AGGATTCGCA CAGGCCTCGG TCGAGGCACC 
TTGCCCCGCG AATCCAGAGA GGCCCTGGAC GCCCGCCTGG ACGGCACGCT CAATCCGGAC 
AAGCCACTGC GCCCACGCCT GCCCGACACG CCACTCGCCG CGCTATTCCG TGAACGCCTG 
GAGGCCATCG CCGGCACACT GCAGACCCTG CACGATGAGG CCTACATCCC CGGCGCCGTA 
GCGACCTACC ACGCCAGCCG ACAGGTCACG GGCCCCATCG CCGTCGCCCC GTCACTGCAG 
GAGCTCGACT GGTCCGCCAC CGGCCTGGAA CCCCGCTTCG GCCGCAGCCA CGGCGAGGAA 
CTGCTGTGCG TCAGCCGCGC CTTCTGCGCC ATCGCCGAGA CCGGCACCCT GGTCCTGCTC 
TCCGGCCCCG AAAACCCCAC GACGCTCAAC TTCCTGCCGG ATCATCACCT GGTGGTCCTC 
GATGCCGCGG ACGTGCTGAG TCACATCGAG GATGCCTGGG CCCGCATCCG CACCCGGGAT 
GCCGACTGGC CGCGCACGGT GAACCTGATC ACCGGCCCCT CCCGCACCGC TGATGTGGAG 
CAGACCATCC AGTTGGGGGC CCATGGGCCG AGGAGCCTGC ATGTGCTGCT CATCAATTCA 
CCACGGGTTG CCTAG
 
Protein sequence
MSAARDKILA RIRTGLGRGT LPRESREALD ARLDGTLNPD KPLRPRLPDT PLAALFRERL 
EAIAGTLQTL HDEAYIPGAV ATYHASRQVT GPIAVAPSLQ ELDWSATGLE PRFGRSHGEE 
LLCVSRAFCA IAETGTLVLL SGPENPTTLN FLPDHHLVVL DAADVLSHIE DAWARIRTRD 
ADWPRTVNLI TGPSRTADVE QTIQLGAHGP RSLHVLLINS PRVA