Gene Tgr7_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3088 
Symbol 
ID7316018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp3233723 
End bp3234370 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID643617987 
Producturea carboxylase-associated protein 1 
Protein accessionYP_002515144 
Protein GI220936245 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.712577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAG CACTCGTCGA AAGCCCCCTG GATGCCAGCC AGGCGGTGTT CCGCCAGGTG 
GTCCCCGCGG GGGAACCCTT CACCGGCATC GTGCGCAAGG GCCAGACCCT GCGCATCCTG 
GACCTGGAAG GCAACCAGGC CGTGGACACC CTGTTCTACA ACGCGGACGA CCCGGAGGAG 
CGCTACAGCG CCAACGACAC CATCCGCGCC CAGGGTAACA TCTACCTCAG CACCGGCACC 
CAGCTCCTGT CCAGCGAGGG CCGGGTGATG CTCACCATCA CCGCCGACAC CTGCGGCCGT 
CACGACACCC TGGGCGGCGC CTGCTCGGCG GAGAGCAACA CCGTGCGCTA CGCTCTGGAC 
AAGCGCCACA TGCACAGCTG CCGGGACAGC TTCCTGCTGG CGCTGGCCGA GCACGACCAC 
GGCATGGGCA AGCGGGACCT GTCGTCGAAC ATCAACTTCT TCATGAACGT GCCGGTCACC 
CCCGAGGGCG GCCTGTGTTT CGCCGACGGC CTCTCGGCGC CGGGACGCTA CGTGGAGATG 
CGCGCGGAAA TGGACGTGCT GGTGCTGATC TCCAATTGCC CGCAGCTCAA CAACCCCTGC 
AACGCCTACA ACCCGACGCC GGTGGAGGTC CTGGTCTGGG ACGCGTGA
 
Protein sequence
MSTALVESPL DASQAVFRQV VPAGEPFTGI VRKGQTLRIL DLEGNQAVDT LFYNADDPEE 
RYSANDTIRA QGNIYLSTGT QLLSSEGRVM LTITADTCGR HDTLGGACSA ESNTVRYALD 
KRHMHSCRDS FLLALAEHDH GMGKRDLSSN INFFMNVPVT PEGGLCFADG LSAPGRYVEM 
RAEMDVLVLI SNCPQLNNPC NAYNPTPVEV LVWDA