Gene Tgr7_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2973 
Symbol 
ID7318270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp3112619 
End bp3113617 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content68% 
IMG OID643617873 
Product5'-3' exonuclease 
Protein accessionYP_002515032 
Protein GI220936133 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.727762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGATC CCGACCGCGC CAGCCCCCTG TGGCTGGTGG ACTCCAGCAT CTACGTGTTC 
CGCGCCTGGT TCACCCTGCC CGAGGCCATC ACCGACCGTG AGGGCCACCC GGCCAATGCG 
GTGACCGGTT TCGGCGAGTT CCTGGTGCGC CTGCTCACCC GGGCCGCGCC CGCGCCGGTG 
GTGTTCGCCT TCGACGAAAG CCTGGGCCAG TCCTACCGTC ACGAGATCTA CCCCGAGTAC 
AAGGCCAATC GCCCGCCGGC CCCGGAATCC CTCAAGCGCC AGTTCCGCCA GTGCCGCGCC 
CTGGTCACTG CCCTGGGCTT TCCGGCCTTC TCCAGCCCCC GCTACGAGGC CGACGACATC 
ATCGGCACCC TGACCGCCCG CCAGCAGGCC GCGGGCGGCA GCGTGCACCT GATCACCGCC 
GACAAGGACC TGACCCAGCT GGTGGGCCCC GGCGACCTGT GGTGGGAATT CCAGCAGGAC 
CGGCGCCTGG ACGCCCGGGG CGTGGAGAAG AAGCTGGGCG TGCGCCCGGA GCAGGTGGCC 
GATCAGCTGG CCCTGGCCGG CGACAAGGTG GACAACATCC CCGGCGTGCC CGGCATCGGC 
ATGGCCACCG CCGCGCGCAT CCTGCGCCGG TTCGGCGACC TGGACACGCT GTTTGCCGAC 
ACCGATGAGG TGGCGAAACT GCACATCCGC GGCGCCAGGC GCCTGGCGGA CCTGGTCCGC 
GAGCACGAGC ACAGCGTGCG CCTCTCGCGT CGGCTCACCG GCATCCACTG CGACATCGAA 
GACCTGCCGC AAGCCCTGGA CCTCAGCCCC GCCGCCCCGG ACCGCGCGGC GTTGACCGCG 
CTCCTGGATC AGCTCGGCAT CGACGGCCCG CGCCGTGTGC GCTGGGAAGC GCTGATCGAC 
AGGCTGGAAG ACAATTCAAG ATTCAAGATT CAAGATTCAA AATTCAAAAT TCAAAATTCA 
AAGAACCACG ACTCCACCCC TTTGAATCTT GAATCTTGA
 
Protein sequence
MTDPDRASPL WLVDSSIYVF RAWFTLPEAI TDREGHPANA VTGFGEFLVR LLTRAAPAPV 
VFAFDESLGQ SYRHEIYPEY KANRPPAPES LKRQFRQCRA LVTALGFPAF SSPRYEADDI 
IGTLTARQQA AGGSVHLITA DKDLTQLVGP GDLWWEFQQD RRLDARGVEK KLGVRPEQVA 
DQLALAGDKV DNIPGVPGIG MATAARILRR FGDLDTLFAD TDEVAKLHIR GARRLADLVR 
EHEHSVRLSR RLTGIHCDIE DLPQALDLSP AAPDRAALTA LLDQLGIDGP RRVRWEALID 
RLEDNSRFKI QDSKFKIQNS KNHDSTPLNL ES