| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2866 |
|---|
| Symbol | |
|---|
| ID | 7315303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 3006101 |
|---|
| End bp | 3007621 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643617766 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002514926 |
|---|
| Protein GI | 220936027 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.582536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCT ACACCACGGA CTATCTTGAG TATTACCTGA CACTGGTTGC CTGGATCATC
AACAACGGCA TCTGGAATGT GCTGGTGGCC AGCGGCATCT TCGCGCTGCC GTTCCTCGCC
ATCGTCGTGC AGGAATGGCT CAAGGCCCGT GCGGAAGGCG CGGACGAAGG GAACAAGGGC
GTGCTCTCGT CCATGCGCAT CGAGAACCGC GTGTGGGTGG CGATTGTGGT CATCCTGTTC
GCCGGCATTC CCTTCATTCC CCTTGACCTG AGCACCATCC AGTTCGATCG CACGCGCTCG
ACCCAATGCC AGGTCAATGT GCCGCTGCCC TCGGAAACGA ACTGGTCCAC TTCGTTCACG
ACGATGAACA ACCAGAGTGC CCATGTGCCG GTCTGGTGGT TCTTCATGCA CTCGCTGTCG
AAGGCCGTCA CCAGCGCCGC CGTGGCGGCG ATCCCCTGCG GCACGGACCT GCGGCAGATG
CGCATGGAGA TCGACAGCAC GCGCATCGCC GACCCGGTGC TGGCCCAGGA AGTCGCCGAC
TTCACGCACG ACTGCTACGG GCCGGCCCGC GCCAGGCTGT TCATGAGCCG GCCGACACTC
AGCGAGGAGC AGATGAACGA CGTGACCTGG ATCGGTTCGC GCTTCTTCCT GGACACGGCC
GGCTTCTACG ATACGTATCG CTCGCGCGGA CCACGCGACG CCTGGCCCTA TGACGACACG
CGCGACGCCG GCCTCGCCGA AGTCTCCACT GGCGGCGGCT ATCCGACCTG TCGGCAGTGG
TGGGCGGACA GCGGCGATGG GCTGCGCGAT CGCCTGCTGG CCCAGGTTGA TCCGGGCCTG
CTGTCCCGGC TCGGCCAATG GGCCGGTTTC CTGAGCCAGG CCCAGGCCGA CGATGCCGTG
ATTCGTGCCA TCGCTTCACC ACGGCAACAG GTCATGAACC AGGGACACGT CTACACCGAC
TACGGTGGTC AGATCGGTAT GACGCTCCCC AACGTCGCCA CCCGCGTCGT ATCGGATGTG
GGGCTGACGG TAGGATCACT CGGAATGTTT CCGGCCATGG ATGTGGTGCG TCAGGCGTTG
CCCATGATCC TGTCGTTCCT GAAGATGGCG ATGGTCATCT GCATTCCGCT GGTGCTGATC
TTCGGCACCT ACGACTTGCG AACGGTGGTG ACGGTGACTG CCGTGCAGTT CTCGCTGTTC
TTCGTCGATT TCTGGTTCCA GCTCGCCCGC TGGATCGATT CCACGATCTT GAACGCGCTC
TACGGCTGGC ACTCGCCGCA CAGCAACTTC AATCCGCTGA TGGGTTTGAA CAACGCCTTC
GGCGATATGT TGTTGAACTT CGTGATGGCG ACGATGTTCA TCATCCTGCC GGGCTTCTGG
GTCGTTGCAT TGACGTGGGC CGGGGTCAGG ACGGGGAACA TTCTCGGGGG GTTCATCACC
GGCACGACGG ATGCGAAGTC GGCGGGCAGT AGCGGCTCGC GCCTCGCCAT GGCGGCGGCG
ACGAAAGGCG CTGCGAAGTA A
|
|---|
| Protein sequence | MTLYTTDYLE YYLTLVAWII NNGIWNVLVA SGIFALPFLA IVVQEWLKAR AEGADEGNKG
VLSSMRIENR VWVAIVVILF AGIPFIPLDL STIQFDRTRS TQCQVNVPLP SETNWSTSFT
TMNNQSAHVP VWWFFMHSLS KAVTSAAVAA IPCGTDLRQM RMEIDSTRIA DPVLAQEVAD
FTHDCYGPAR ARLFMSRPTL SEEQMNDVTW IGSRFFLDTA GFYDTYRSRG PRDAWPYDDT
RDAGLAEVST GGGYPTCRQW WADSGDGLRD RLLAQVDPGL LSRLGQWAGF LSQAQADDAV
IRAIASPRQQ VMNQGHVYTD YGGQIGMTLP NVATRVVSDV GLTVGSLGMF PAMDVVRQAL
PMILSFLKMA MVICIPLVLI FGTYDLRTVV TVTAVQFSLF FVDFWFQLAR WIDSTILNAL
YGWHSPHSNF NPLMGLNNAF GDMLLNFVMA TMFIILPGFW VVALTWAGVR TGNILGGFIT
GTTDAKSAGS SGSRLAMAAA TKGAAK
|
|---|
| |