| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2859 |
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| Symbol | |
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| ID | 7315296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2998441 |
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| End bp | 3001323 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643617759 |
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| Product | AAA ATPase |
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| Protein accession | YP_002514919 |
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| Protein GI | 220936020 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTGGT CGCTGCCGTG GCCGCGCAAA CCTGTGTCGG CATCCGAGGA ATCCGAGGCA
CAGCAGGCCG ACGCCTGGCA ACGCCATGTG GCCGGCCTGA AAGCGCATGG CATTCCCGAG
CCCGGCACCC GCCTCGATCC GAAACACCGG CCCGCCACGC AGGCGGATGA ACAGGCCCTC
TACGACGTGG CGCCGTCCTT CGTGGACCTG TTGCCGTGGG TGGAATATCT GGCCGACGCC
AAGAGCCTGT TGCTGGAGGA TGGTGAATCG GTGGCGGCGT TCTTTGAGCT GACACCGATC
GGCACCGAAG GACGCGAAAG CGATTGGCTG TGGCAGGCCC GAGACGCGCT GGAGAATGCC
CTACAGGACA GCTTCGACGA ACTCGACGAG CAACCCTGGG TGGTGCAGCT CTATGCCCAG
GACGAAGCCG ACTGGACGGA CTATCTGAAC GTATTGCGGG ACTACATCCA GCCGCGCGCG
CAGGGCAGCG CGTTCAGCGA CTTCTACCTG CGGTTCTTCG CGCATCACCT GCGGGCCATC
ACCAAGCCGG GCGGCCTGTT CGACGACACC ACCGTGACCC ACCTGCCGTG GCGCGGCCAG
ACGCGGCGCG TGCGCATGGT GGTCTATCGT CGCACGCCGG GCGCTTCACA CCGTCGCGGC
CAATCGCCCG AACAGGCCCT GGCGACGGTA TGCGACCGGC TGGCCGGCGG TCTCGCCAAT
GCGGGCGTCA AGGCGCGGCG CCTGGGCGCG GCGGACATCC ACGCCTGGTT GCTGCGCTGG
TTCAACCCGA ACCCGACCTT GCTAGGCGCG ACGGCTGCCG ATCGTGAACG CTTCTACCAG
TTGGCCGCCT ACCCCGAAGA AGCAAACGAA GGCGACGTCG AACTCGCCAG CGGCACGGAC
TTCTCGCAAC GGCTGTTCTT CGGCCAGCCA CGCTCCGACG TGGCGAACGG CATCTGGTTT
TTCGACGACA TGCCGCATCG GGTCATGGTG CTCGACCGGC TGCGCACACC GCCGACAACC
GGACACCTGA CCGGGGAAAC ACGCAAAGGC GGCGATGCCT GCAACGCGCT GTTCGACCAG
ATGCCCGAGG ACACGGTGAT GTGTCTCACC CTCGTCGCCA CGCCACAGGA CGCACTGGAA
GCACATCTGA ACTACCTGGG CAAGAAAGCG GTCGGCGAAA CGCTGGCGTC CGAGCAGGCC
CGGCAGGACG TGCAGCAGGC ACGTTCGCTG ATCGGCAGTT CGCACAAGCT CTATCGCGGC
GCGCTGGCCT TCTACCTGCG CGGGCGCGAC ATGGCCGAAC TTGACGCGCG CGGCCTGCAA
CTCGCCAACG TCATGCTCAA CGCCGGCCTC CTGCCCGTGC GCGAAGAGGA TGAGGTCGCG
CCGCTCAACA GCTATCTGCG CTGGCTTCCC TGCCTCTATG ACCCGGCCAG GGATCGACGC
CAGTGGTACA CCCAGCTCAT GTTCGCGCAG CACGCGGCGA ATCTCACGCC CGTGTGGGGG
CGCAATCAGG GCACCGGGAA CCCCGGCATC ACCTTCTTCA ATCGCGGTGG CGGCACCGTC
GCCTTCGACC CGCTCAACCG GCGCGACCGG CAGATGAATG CCCATCTGTT TCTGTTCGGC
CCGACCGGCT CGGGCAAATC GGCCACGCTC AACAACATCC TCAACCAGCT CGTCGCGATC
TACCGGCCCC GGCTGTTCAT CGTCGAGGCG GGGAACAGCT TCGGTCTGTT TGGCGAATTC
GCCCAGCGCC TTGGCCTGAC GGTGCATCGG GTGAAGCTCG CGCCCGGCGC TGGCGTGAGC
CTCGCGCCCT TTGCCGATGC GTGGCGTCTG GTGGATACGC CCAGCCAGGT GCGGACGCTG
GACGCCGATG CCCTGGACGA GGAACAGGAA CCCGAAGACG CATCGAGCGA AAGCGATGAA
CAGCGCGACG TGCTCGGCGA GTTGGAGATC ACCGCCCGCC TGATGATTAC CGGCGGCGAG
GACAAGGAAG AGGCGCGCAT GACCCGCGCC GATCGCAGCC TGATCCGCCA GTGCATTCTC
GACGCGGCGC ATCGCTGTGC GCCGGAGAAG CGCACGGTGC TGACCGAGGA CGTGCGCAAC
GCCCTGCGCG AGCGCGCCAG CGATTCCGCG CTGCCAGAAG CCCGGCGCGC TCGCCTGCTG
GAAATGGCGG ACGCGATGGA TATGTTTTGC CAGGGCCTGG ATGGGGAAAT GTTCAATCGT
CCCGGCACGC CATGGCCGGA AGCCGACATC ACCATCGTCG ATCTGGCGAC CTTCGCGCGC
GAGGGCTACA ACGCGCAGCT TTCCATCGCC TATATCTCGC TCATCAACAC CGTCAACAAC
ATCGCCGAGC GGGATCAATT CCTGGGGCGC CCCATCGTCA ACGTCACTGA CGAGGGTCAC
ATCATCACCC GCAATCCATT GCTTGCCCCT TACGTCGTCA AGATCACCAA GATGTGGCGC
AAGCTCGGCG CCTGGTTCTG GCTGGCGACG CAGAACCTGG ACGATCTGCC CAAGGCCGCC
GAACCGATGC TGTCGATGAT CGAGTGGTGG ATCTGCCTGT CGATGCCACC CGACGAAGTG
GAGAAGGTCG CGCGCTTCCG CGAACTCAAT CCGGCACAGA AGGCGCTGAT ACTGTCGGCG
CGCAAGGAGT CCGGCAAGTT CAGCGAAGGC GTGATCCTGT CGAAGTCGAT GGAAGTCCTG
TTCCGCGCCG TGCCGCCGAG TCTCTACCTG GCCATGGCGA TGACCGAGCC CGAGGAGAAG
GCCGAGCGCT ATCAGTTGAT GCGGCAACAC GGCATCGGTG AGCTGGAGGC CGCTTTCAAG
GTCGCGGAGA AAATCGACCG GGCACGCGGC ATCGAGCCAT TGCCGCTCGA CGCCCTCGGT
TGA
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| Protein sequence | MAWSLPWPRK PVSASEESEA QQADAWQRHV AGLKAHGIPE PGTRLDPKHR PATQADEQAL
YDVAPSFVDL LPWVEYLADA KSLLLEDGES VAAFFELTPI GTEGRESDWL WQARDALENA
LQDSFDELDE QPWVVQLYAQ DEADWTDYLN VLRDYIQPRA QGSAFSDFYL RFFAHHLRAI
TKPGGLFDDT TVTHLPWRGQ TRRVRMVVYR RTPGASHRRG QSPEQALATV CDRLAGGLAN
AGVKARRLGA ADIHAWLLRW FNPNPTLLGA TAADRERFYQ LAAYPEEANE GDVELASGTD
FSQRLFFGQP RSDVANGIWF FDDMPHRVMV LDRLRTPPTT GHLTGETRKG GDACNALFDQ
MPEDTVMCLT LVATPQDALE AHLNYLGKKA VGETLASEQA RQDVQQARSL IGSSHKLYRG
ALAFYLRGRD MAELDARGLQ LANVMLNAGL LPVREEDEVA PLNSYLRWLP CLYDPARDRR
QWYTQLMFAQ HAANLTPVWG RNQGTGNPGI TFFNRGGGTV AFDPLNRRDR QMNAHLFLFG
PTGSGKSATL NNILNQLVAI YRPRLFIVEA GNSFGLFGEF AQRLGLTVHR VKLAPGAGVS
LAPFADAWRL VDTPSQVRTL DADALDEEQE PEDASSESDE QRDVLGELEI TARLMITGGE
DKEEARMTRA DRSLIRQCIL DAAHRCAPEK RTVLTEDVRN ALRERASDSA LPEARRARLL
EMADAMDMFC QGLDGEMFNR PGTPWPEADI TIVDLATFAR EGYNAQLSIA YISLINTVNN
IAERDQFLGR PIVNVTDEGH IITRNPLLAP YVVKITKMWR KLGAWFWLAT QNLDDLPKAA
EPMLSMIEWW ICLSMPPDEV EKVARFRELN PAQKALILSA RKESGKFSEG VILSKSMEVL
FRAVPPSLYL AMAMTEPEEK AERYQLMRQH GIGELEAAFK VAEKIDRARG IEPLPLDALG
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