| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2678 |
|---|
| Symbol | |
|---|
| ID | 7315397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2820268 |
|---|
| End bp | 2821635 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643617579 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002514740 |
|---|
| Protein GI | 220935841 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.176032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA TCCTCGTATT GATGGTTTTC CTGCTGGCGG CGCTGTCGCT GGCGGGGTGC
AACAGCAGTT CCTCTTCATC CTCATCCTCC GACCCGACGA CCCAGGTGCG CGTCCTGCAC
GCTTCTCCCG ACGCGCCCGC GGTCAACATC CTGGCGGGTG GTTCGCCCGT GCTGGAAGGC
GTGGATTACA AGGATGGTTC CGGTTACCTG ACCGTCCCGG CCGGCAGTCT TGAGGTGGCC
GTCGACGGCC TTCTGCCTGG TGGAGCAACG TTGACCGTCA TCGGTCCTCT GGACATTGAT
CTGGAGGCCG GGACCCAGTA CACGGTGGTG GCGTTCGGGG AGGTGACGGA AATCAAGCCT
CTGCTGATCA CTGTCGACCG CGTGACCGTG GGTGCCGGCG AAACCCGCAT CCAGGTATTG
CACGCGGCAC CCAACGCCCC TGAGGTGGAT GTCTATCTGC TGCCTCCCGA CACCAACACC
GTTCCCGAAG GTGTCGCACC CGTCGGCACC TTCGAGGCTG AAGGCGTGCT CGGTCCCGTC
AACGTCCAGG CGGGCAGCTA CCAGATCATC GTGACCCTCG CGGATGATGC CGACACCATC
GTGTTTGACT CCGGCACGGT TGATTTGCCC GGTGGCGCCG ATCTGCTGGT GGTCGCGGTG
CAGAATACAG CTGCCGGTGA CGCTCCCATC AGCCTGGTGG TGATGGATGG CGAAGGTTCC
ACTGAGATCC TGGACAAGAA CAGTCCGGCC AATGTACGGG TGGTGCATGC CTCGGCTGAT
GCGCCCAATG TGGACGTGGT GGCCAATGAT GTTGTCACGC TGGTCAATGA TCTTGCCTTC
CCGGAGTTCA CTGCATACCT GGCGCCTGCC CCTGATACCT ACAACATCAA GGTTGGCCCC
ACGGGCAACG CCGTGGGCAA CCCGGTCATC GAGGCGGATC TGACCCTGGA GGCCGGGCAG
AGCTACACCG TGATTGCTGT AGGTACGCTG GCCGAGATCG AGCCCCTGGT CCTGGTGGAC
AACCGGCGTC GGATCGCCAC CGAGGCCCGC GTGCGCATCG TGCATGCTTC GACGCTGGCC
GGGAATGTGG ATATCTTCGT GACCGATGCG GCCGATACCG ATCTGACCAC TGTCGATCCG
GTGTTCAGCG ATGTGCCCTT CAAGGCTGAG ACCGGTTATG TGTCGCTGGC AGCCGGCACC
TACTTTGTGA CCGTGACGCC TGTTGGCGAG CCGGAAACAG CTGCCATCGG TCCCGTGGAG
CTGGAACTCG AGGCAGGCGG CCTCTACGGC GCCATCGCCC GTGATCCGCT CCCGCCCGAA
ACTGACTTGG GACTTATCCT GCTGGACGAC CTGGCGGAGC CCATCTAA
|
|---|
| Protein sequence | MKRILVLMVF LLAALSLAGC NSSSSSSSSS DPTTQVRVLH ASPDAPAVNI LAGGSPVLEG
VDYKDGSGYL TVPAGSLEVA VDGLLPGGAT LTVIGPLDID LEAGTQYTVV AFGEVTEIKP
LLITVDRVTV GAGETRIQVL HAAPNAPEVD VYLLPPDTNT VPEGVAPVGT FEAEGVLGPV
NVQAGSYQII VTLADDADTI VFDSGTVDLP GGADLLVVAV QNTAAGDAPI SLVVMDGEGS
TEILDKNSPA NVRVVHASAD APNVDVVAND VVTLVNDLAF PEFTAYLAPA PDTYNIKVGP
TGNAVGNPVI EADLTLEAGQ SYTVIAVGTL AEIEPLVLVD NRRRIATEAR VRIVHASTLA
GNVDIFVTDA ADTDLTTVDP VFSDVPFKAE TGYVSLAAGT YFVTVTPVGE PETAAIGPVE
LELEAGGLYG AIARDPLPPE TDLGLILLDD LAEPI
|
|---|
| |