| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2549 |
|---|
| Symbol | |
|---|
| ID | 7315646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2687973 |
|---|
| End bp | 2688986 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643617451 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_002514612 |
|---|
| Protein GI | 220935713 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.30655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAT CCGCCGCGCC CCCCGCCACC CCCAACCGCC TGCGCCAGCT GCGTGCCTTC
TGCCAGGCGG CCCAGACCGG CAGCATCTCC CGGGCCGCCG AGCGCCTGTG CGTGAGTCAA
CCCTCGGTGT CGCTGCTGAT CAAGGGGCTG GAGCAGGACC TTAACGTGCT GCTGTTCGAG
CGCCGCGGCC CGCGCATCGA GCTGACCGCG GCCGGCCAGG TGCTGCTGGA GACCAGCCTG
CCCCTGGTGG AGGGCATGGA CCACCTGCCG GAGGTGTTCG CCGCGCGCCT GGGCGAGGCG
GGCCAGGGCA GCCTGGACCT GGCGGCGGGG GAATCCACCA TCCTTTACCT GCTGCCCGAG
TACGTGAAGC GTTTCAGCGA GCGTTACCCG GCGGTGAAGC TGCACCTGCA CAACGTCACC
GGCCGGGACG GCCTGAAGAT GCTGCGTGCG GGCGAGGTGG ACTTCGCCGT GGGCTCCATG
ATCGACGTGC CCGAGGACAT GCACTACCAC CCCATCTTCA CCTACGAGCC CATGCTCATC
ACCGCCCTCA ACCATCCCCT GGCGAAGAAA AAGAAGGTGA GCCTGGAGGA CGTCTCCCCC
TGCGGGCTGA TCCTGCCGCC GCGGCATCTC TCCACCTGGT CGATCGTGGA CCTGGTGTTT
CATCAGCACG GCCTGGATTA CCACGTGGTG CTGGAGGCCG GCGGCTGGGA GGTGATCAAG
AAGTTCGTGG AACTGGACAT GGGCGTGTCC ATCGTCACCA GCATCTGCCT GACCGGCGAG
GAGAAGCTGG CCGCCATTCC GCTGAGCGAC TACTTCCCCA GGCGCACCTA CGGCGTGGTG
ATGCGCAAGG GCAAGTTCCT GTCACCCCAG GCCTGCTCCT TCCTGGAGCT CATGGACCCG
GACTTCACCC GCTGCCGGCA CGCCGACCAG ATGCGCATGC TGGGCACGGG CCGCGTCGCG
GACATGGTGG AGCAGAGTGT CGATTTCACC GGCCACGACC GCTCCTACCC CTGA
|
|---|
| Protein sequence | MSRSAAPPAT PNRLRQLRAF CQAAQTGSIS RAAERLCVSQ PSVSLLIKGL EQDLNVLLFE
RRGPRIELTA AGQVLLETSL PLVEGMDHLP EVFAARLGEA GQGSLDLAAG ESTILYLLPE
YVKRFSERYP AVKLHLHNVT GRDGLKMLRA GEVDFAVGSM IDVPEDMHYH PIFTYEPMLI
TALNHPLAKK KKVSLEDVSP CGLILPPRHL STWSIVDLVF HQHGLDYHVV LEAGGWEVIK
KFVELDMGVS IVTSICLTGE EKLAAIPLSD YFPRRTYGVV MRKGKFLSPQ ACSFLELMDP
DFTRCRHADQ MRMLGTGRVA DMVEQSVDFT GHDRSYP
|
|---|
| |